9mlc

Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome activated elongation complex Composite map T

Method: ELECTRON MICROSCOPY Dmax: 252.0 Å Quality: GOOD

1. 蛋白身份与相关结构 Protein Identity & Related Structures

DNA-directed RNA polymerase subunit beta

物种未注明

UniProt I3LGP4

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 B; UniProt 1–1300 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 50 个其他 PDB 条目、50 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 I3LGP4_PIG
Isoform
PDB实体 2
链与序列区间 作者链 B; PDB构建体 1–1300; UniProt 1–1300

DNA-directed RNA polymerase II subunit RPB3

物种未注明

UniProt A0A481DF93

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 C; UniProt 46–320 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 27 个其他 PDB 条目、27 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 A0A481DF93_PIG
Isoform
PDB实体 3
链与序列区间 作者链 C; PDB构建体 1–275; UniProt 46–320

RPOL4c domain-containing protein

物种未注明

UniProt A0A8D1GCS3

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 D; UniProt 1–184 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 2 个其他 PDB 条目、2 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 A0A8D1GCS3_PIG
Isoform
PDB实体 4
链与序列区间 作者链 D; PDB构建体 1–184; UniProt 1–184

DNA-directed RNA polymerase II subunit E

物种未注明

UniProt A0A4X1VTX4

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 E; UniProt 1–210 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 46 个其他 PDB 条目、46 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 A0A4X1VTX4_PIG
Isoform
PDB实体 5
链与序列区间 作者链 E; PDB构建体 1–210; UniProt 1–210

DNA-directed RNA polymerases I, II, and III subunit RPABC2

物种未注明

UniProt A0A4X1VEK9

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 F; UniProt 1–127 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 57 个其他 PDB 条目、57 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 A0A4X1VEK9_PIG
Isoform
PDB实体 6
链与序列区间 作者链 F; PDB构建体 1–127; UniProt 1–127

DNA-directed RNA polymerase II subunit RPB7

物种未注明

UniProt A0A4X1VKG7

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 G; UniProt 1–172 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 83 个其他 PDB 条目、83 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 A0A4X1VKG7_PIG
Isoform
PDB实体 7
链与序列区间 作者链 G; PDB构建体 1–172; UniProt 1–172

DNA-directed RNA polymerases I, II, and III subunit RPABC3

物种未注明

UniProt A0A8D1AQR7

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 H; UniProt 1–150 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 11 个其他 PDB 条目、11 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 A0A8D1AQR7_PIG
Isoform
PDB实体 8
链与序列区间 作者链 H; PDB构建体 1–150; UniProt 1–150

DNA-directed RNA polymerase II subunit RPB9

物种未注明

UniProt P60899

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 I; UniProt 1–125 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 111 个其他 PDB 条目、111 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPB9_PIG
Isoform
PDB实体 9
链与序列区间 作者链 I; PDB构建体 1–125; UniProt 1–125

DNA-directed RNA polymerases I, II, and III subunit RPABC5

物种未注明

UniProt A0A8W4F9W9

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 J; UniProt 1–67 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 11 个其他 PDB 条目、11 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 A0A8W4F9W9_PIG
Isoform
PDB实体 10
链与序列区间 作者链 J; PDB构建体 1–67; UniProt 1–67

RNA polymerase II subunit J

物种未注明

UniProt A0A8D0TE17

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 K; UniProt 1–117 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 9 个其他 PDB 条目、9 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 A0A8D0TE17_PIG
Isoform
PDB实体 11
链与序列区间 作者链 K; PDB构建体 1–117; UniProt 1–117

RNA polymerase II subunit K

物种未注明

UniProt A0A4X1TRS6

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 L; UniProt 1–58 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 56 个其他 PDB 条目、56 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 A0A4X1TRS6_PIG
Isoform
PDB实体 12
链与序列区间 作者链 L; PDB构建体 1–58; UniProt 1–58

Transcription elongation factor 1 homolog

Homo sapiens

UniProt P60002

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 O; UniProt 1–83 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 4 个其他 PDB 条目、4 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 ELOF1_HUMAN
Isoform
PDB实体 15
链与序列区间 作者链 O; PDB构建体 1–83; UniProt 1–83

RNA polymerase-associated protein CTR9 homolog

Homo sapiens

UniProt Q6PD62

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 Q; UniProt 1–1173 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 20 个其他 PDB 条目、20 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 CTR9_HUMAN
Isoform
PDB实体 17
链与序列区间 作者链 Q; PDB构建体 1–1173; UniProt 1–1173

Transcription elongation factor A protein 1

Homo sapiens

UniProt P23193

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 S; UniProt 1–301 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 25 个其他 PDB 条目、25 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 TCEA1_HUMAN
Isoform
PDB实体 19
链与序列区间 作者链 S; PDB构建体 1–301; UniProt 1–301

RNA polymerase-associated protein LEO1

Homo sapiens

UniProt Q8WVC0

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 U; UniProt 1–666 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 19 个其他 PDB 条目、20 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 LEO1_HUMAN
Isoform
PDB实体 21
链与序列区间 作者链 U; PDB构建体 1–666; UniProt 1–666

RNA polymerase II-associated factor 1 homolog

Homo sapiens

UniProt Q8N7H5

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 V; UniProt 1–531 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 20 个其他 PDB 条目、21 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 PAF1_HUMAN
Isoform
PDB实体 22
链与序列区间 作者链 V; PDB构建体 1–531; UniProt 1–531

WDR61

Homo sapiens

UniProt Q9GZS3

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 W; UniProt 1–305 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 27 个其他 PDB 条目、30 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 WDR61_HUMAN
Isoform
PDB实体 23
链与序列区间 作者链 W; PDB构建体 1–305; UniProt 1–305

Parafibromin

Homo sapiens

UniProt Q6P1J9

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 X; UniProt 1–531 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 20 个其他 PDB 条目、21 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 CDC73_HUMAN
Isoform
PDB实体 24
链与序列区间 作者链 X; PDB构建体 1–531; UniProt 1–531

Transcription elongation factor SPT4

Homo sapiens

UniProt P63272

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 Y; UniProt 1–117 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT5 × 1 (O00267) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 30 个其他 PDB 条目、30 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 SPT4H_HUMAN
Isoform
PDB实体 25
链与序列区间 作者链 Y; PDB构建体 1–117; UniProt 1–117

Transcription elongation factor SPT5

Homo sapiens

UniProt O00267

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 Z; UniProt 1–1087 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Protein IWS1 homolog × 1 (Q96ST2) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 53 个其他 PDB 条目、57 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 SPT5H_HUMAN
Isoform
PDB实体 26
链与序列区间 作者链 Z; PDB构建体 1–1087; UniProt 1–1087

Protein IWS1 homolog

Homo sapiens

UniProt Q96ST2

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 其他组合 异源复合物 蛋白 × 24 DNA 2 RNA 1 PDB 声明:27-meric(27) 与全部聚合物数一致 链 i; UniProt 1–819 未记录 DNA-directed RNA polymerase II subunit RPB1 × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A481DF93) RPOL4c domain-containing protein × 1 (A0A8D1GCS3) DNA-directed RNA polymerase II subunit E × 1 (A0A4X1VTX4) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A8D1AQR7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A8W4F9W9) RNA polymerase II subunit J × 1 (A0A8D0TE17) RNA polymerase II subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 DNA (194-MER) × 1 Transcription elongation factor 1 homolog × 1 (P60002) ;RNA (5'-R(P*UP*UP*UP*GP*GP*UP*GP*UP*GP*UP*CP*UP*GP*GP*GP*UP*GP*GP*UP*G)-3') ; × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) RNA polymerase-associated protein RTF1 homolog × 1 Transcription elongation factor A protein 1 × 1 (P23193) DNA (194-MER) × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WDR61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZN ZINC ION × 10 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.4 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 2.40 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 10 个其他 PDB 条目、10 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 IWS1_HUMAN
Isoform
PDB实体 27
链与序列区间 作者链 i; PDB构建体 1–819; UniProt 1–819

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

SAXS 散射曲线 SAXS Profile

SAXS profile for 9mlc

P(r) 距离分布 P(r) Distribution

P(r) distribution for 9mlc
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2. 结构基本信息 2. Structure Basics

条目编号 entry_id9mlc
沉积日期 deposition_date2024-12-19
结构标题 titlePol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome activated elongation complex Composite map T
关键词 keywordspolymerase, elongation factor, nucleosome, TRANSCRIPTION; TRANSCRIPTION
实验方法 methodELECTRON MICROSCOPY

3. SAXS 参数 (CRYSOL 理论计算) 3. SAXS Parameters (CRYSOL)

回转半径 Rg (Guinier) rg_guinier70.56
回转半径 Rg (电子) rg_electron69.39
零角强度 I(0) i012681100000.00
分子量 molecular_weight861510.0 kDa
排除体积 excluded_volume1038500 ų
包络体积 envelope_volume1760300 ų
水化壳体积 shell_volume202680 ų
包络直径 envelope_diameter248.6
壳层 Rg shell_rg74.62
包络 Rg envelope_rg69.65
形状 Rg shape_rg69.59
总 Rg total_rg68.85
总原子数 total_atoms60473
残基数 n_residues8413
球谐函数阶数 n_harmonics20
q 范围 q_range— – 0.5000 −1
数据点数 n_points101
壳层类型 shell_typedirectional
溶剂电子密度 solvent_density0.3340 e/ų
壳层衬度 contrast_shell0.0300 e/ų
CRYSOL 版本 crysol_version4.1.3

4. P(r) 距离分布 (GNOM 反演) 4. P(r) Analysis (GNOM)

最大尺寸 Dmax dmax252.0
Rg (实空间) rg_real73.41
Rg 误差 (实空间) rg_real_error1.40
I(0) (实空间) i0_real1.2700e+10
I(0) 误差 (实空间) i0_real_error2.5620e+08
Rg (倒空间) rg_reciprocal70.68
I(0) (倒空间) i0_reciprocal12680000000.0000
解质量估计 total_estimate0.8826
解质量评级 solution_quality GOOD a GOOD solution
P(r) 峰数 n_peaks1
主峰位置 r_peak_primary80.2
偏度 Skewness skewness0.533
峰度 Kurtosis kurtosis0.093
角度范围 angular_range— – 0.1100 −1
当前正则化参数 α current_alpha0.9666
最高正则化参数 α highest_alpha1718000000.0000
实空间数据点数 n_real_points23
GNOM 版本 gnom_version4.1.3
质量判据 quality_criteria AN1: 0.000; Oscil: 0.764; Stabil: 0.900; Sysdev: 1.000; Positv: 1.000; Valcen: 0.959; Smooth: 0.632

5. 晶体学与实验 5. Crystallography & Experiment

6. 实体与聚合物信息 Entities & Polymers (29)

8. 引用文献 (1)

9. 文件与曲线 (10)