9vd9

Cryo-EM structure of the human DSS1-INTAC-PEC complex

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

26S proteasome complex subunit SEM1

Homo sapiens

UniProt P60896

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SEM1_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 0; PDBConstruct 1–70; UniProt 1–70

Integrator complex subunit 9

Homo sapiens

UniProt Q9NV88

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name INT9_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain I; PDBConstruct 1–658; UniProt 1–658

Integrator complex subunit 11

Homo sapiens

UniProt Q5TA45

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name INT11_HUMAN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain K; PDBConstruct 1–600; UniProt 1–600

Integrator complex subunit 2

Homo sapiens

UniProt Q9H0H0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name INT2_HUMAN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain B; PDBConstruct 1–1204; UniProt 1–1204

Integrator complex subunit 4

Homo sapiens

UniProt Q96HW7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name INT4_HUMAN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain D; PDBConstruct 1–963; UniProt 1–963

Integrator complex subunit 7

Homo sapiens

UniProt Q9NVH2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name INT7_HUMAN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain G; PDBConstruct 1–962; UniProt 1–962

DNA-directed RNA polymerase II subunit RPB1

Homo sapiens

UniProt P24928

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB1_HUMAN
Isoform —
PDB entities 8, 12
Chains and sequence ranges Author chain m; PDBConstruct 1–14; UniProt 1618–1631 Author chain 1; PDBConstruct 1–1970; UniProt 1–1970

Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform

Homo sapiens

UniProt P30153

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name 2AAA_HUMAN
Isoform —
PDB entities 10
Chains and sequence ranges Author chain P; PDBConstruct 1–589; UniProt 1–589

Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform

Homo sapiens

UniProt P67775

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PP2AA_HUMAN
Isoform —
PDB entities 11
Chains and sequence ranges Author chain Q; PDBConstruct 1–309; UniProt 1–309

DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2

Homo sapiens

UniProt I3LGP4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name I3LGP4_PIG
Isoform —
PDB entities 13
Chains and sequence ranges Author chain 2; PDBConstruct 1–126; UniProt 1–126

DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2

Homo sapiens

UniProt P30876

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB2_HUMAN
Isoform —
PDB entities 13
Chains and sequence ranges Author chain 2; PDBConstruct 127–1300; UniProt 1–1174

DNA-directed RNA polymerase II subunit RPB3

Homo sapiens

UniProt P19387

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB3_HUMAN
Isoform —
PDB entities 14
Chains and sequence ranges Author chain 3; PDBConstruct 1–275; UniProt 1–275

DNA-directed RNA polymerases I, II, and III subunit RPABC1

Homo sapiens

UniProt P19388

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB1_HUMAN
Isoform —
PDB entities 15
Chains and sequence ranges Author chain 4; PDBConstruct 1–210; UniProt 1–210

DNA-directed RNA polymerases I, II, and III subunit RPABC2

Homo sapiens

UniProt P61218

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB2_HUMAN
Isoform —
PDB entities 16
Chains and sequence ranges Author chain 5; PDBConstruct 1–127; UniProt 1–127

DNA-directed RNA polymerases I, II, and III subunit RPABC3

Homo sapiens

UniProt P52434

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB3_HUMAN
Isoform —
PDB entities 17
Chains and sequence ranges Author chain 6; PDBConstruct 1–150; UniProt 1–150

DNA-directed RNA polymerase II subunit RPB9

Homo sapiens

UniProt P36954

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB9_HUMAN
Isoform —
PDB entities 18
Chains and sequence ranges Author chain 7; PDBConstruct 1–125; UniProt 1–125

DNA-directed RNA polymerases I, II, and III subunit RPABC5

Homo sapiens

UniProt P62875

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB5_HUMAN
Isoform —
PDB entities 19
Chains and sequence ranges Author chain 8; PDBConstruct 1–67; UniProt 1–67

DNA-directed RNA polymerase II subunit RPB11-a

Homo sapiens

UniProt P52435

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB11_HUMAN
Isoform —
PDB entities 20
Chains and sequence ranges Author chain 9; PDBConstruct 1–117; UniProt 1–117

DNA-directed RNA polymerases I, II, and III subunit RPABC4

Homo sapiens

UniProt P53803

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB4_HUMAN
Isoform —
PDB entities 21
Chains and sequence ranges Author chain a; PDBConstruct 1–58; UniProt 1–58

Negative elongation factor A

Homo sapiens

UniProt Q9H3P2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NELFA_HUMAN
Isoform —
PDB entities 24
Chains and sequence ranges Author chain e; PDBConstruct 1–528; UniProt 1–528

Negative elongation factor B

Homo sapiens

UniProt Q8WX92

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NELFB_HUMAN
Isoform —
PDB entities 25
Chains and sequence ranges Author chain f; PDBConstruct 1–580; UniProt 1–580

Negative elongation factor C/D

Homo sapiens

UniProt Q8IXH7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NELFD_HUMAN
Isoform —
PDB entities 26
Chains and sequence ranges Author chain g; PDBConstruct 1–590; UniProt 1–590

Transcription elongation factor SPT4

Homo sapiens

UniProt P63272

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SPT4H_HUMAN
Isoform —
PDB entities 28
Chains and sequence ranges Author chain i; PDBConstruct 1–117; UniProt 1–117

Transcription elongation factor SPT5

Homo sapiens

UniProt O00267

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SPT5H_HUMAN
Isoform —
PDB entities 29
Chains and sequence ranges Author chain j; PDBConstruct 1–1087; UniProt 1–1087

DNA-directed RNA polymerase II subunit RPB7

Homo sapiens

UniProt P62487

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB7_HUMAN
Isoform —
PDB entities 30
Chains and sequence ranges Author chain k; PDBConstruct 1–172; UniProt 1–172

DNA-directed RNA polymerase II subunit RPB4

Homo sapiens

UniProt O15514

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB4_HUMAN
Isoform —
PDB entities 31
Chains and sequence ranges Author chain l; PDBConstruct 1–142; UniProt 1–142

Integrator complex subunit 1

Homo sapiens

UniProt Q8N201

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name INT1_HUMAN
Isoform —
PDB entities 32
Chains and sequence ranges Author chain A; PDBConstruct 1–2190; UniProt 1–2190

Integrator complex subunit 5

Homo sapiens

UniProt Q6P9B9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 6 × 1 (Q9UL03) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name INT5_HUMAN
Isoform —
PDB entities 33
Chains and sequence ranges Author chain E; PDBConstruct 1–1019; UniProt 1–1019

Integrator complex subunit 6

Homo sapiens

UniProt Q9UL03

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 8 × 1 (Q75QN2) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name INT6_HUMAN
Isoform —
PDB entities 34
Chains and sequence ranges Author chain F; PDBConstruct 1–887; UniProt 1–887

Integrator complex subunit 8

Homo sapiens

UniProt Q75QN2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 35 DNA 2 RNA 1 26S proteasome complex subunit SEM1 × 1 (P60896) Integrator complex subunit 9 × 1 (Q9NV88) Integrator complex subunit 11 × 1 (Q5TA45) ;RNA (5'-R(P*UP*AP*AP*CP*CP*GP*GP*AP*GP*AP*GP*GP*GP*AP*AP*CP*CP*CP*AP*CP*U)-3') ; × 1 Integrator complex subunit 2 × 1 (Q9H0H0) Integrator complex subunit 4 × 1 (Q96HW7) Integrator complex subunit 7 × 1 (Q9NVH2) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) THR-SER-PRO-SER-TYR-SER-PRO-THR × 1 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform × 1 (P30153) Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform × 1 (P67775) DNA-directed RNA polymerase II subunit RPB1 × 1 (P24928) DNA-directed RNA polymerase subunit beta,DNA-directed RNA polymerase II subunit RPB2 × 1 (I3LGP4,P30876) DNA-directed RNA polymerase II subunit RPB3 × 1 (P19387) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase II subunit RPB9 × 1 (P36954) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerase II subunit RPB11-a × 1 (P52435) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA (48-MER) × 1 DNA (45-MER) × 1 Negative elongation factor A × 1 (Q9H3P2) Negative elongation factor B × 1 (Q8WX92) Negative elongation factor C/D × 1 (Q8IXH7) Negative elongation factor E × 1 Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) DNA-directed RNA polymerase II subunit RPB7 × 1 (P62487) DNA-directed RNA polymerase II subunit RPB4 × 1 (O15514) Integrator complex subunit 1 × 1 (Q8N201) Integrator complex subunit 5 × 1 (Q6P9B9) Integrator complex subunit 6 × 1 (Q9UL03) Unknown2 × 1 SER-PRO-THR-SER × 1 SER-PRO-LYS-TYR-SER-PRO-THR-SER × 1 ZINC ION × 10 MANGANESE (II) ION × 2 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name INT8_HUMAN
Isoform —
PDB entities 35
Chains and sequence ranges Author chain H; PDBConstruct 1–995; UniProt 1–995

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9vd9
Deposition date deposition_date2025-06-07
Structure title titleCryo-EM structure of the human DSS1-INTAC-PEC complex
Keywords keywordsDSS1, Integrator, INTAC, TRANSCRIPTION; TRANSCRIPTION
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9vd9__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

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9vd9__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9vd9__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)89.49 Å
Rg (electron density)88.72 Å
Total Rg88.65 Å
Atom count113214
Residues14850
Excluded volume2003400 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9vd9__assembly_1__model_1 38-meric (38) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (41)

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7. Citations (1)