7nvr

Human Mediator with RNA Polymerase II Pre-initiation complex

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

TFIIH basal transcription factor complex helicase XPD subunit

Homo sapiens

UniProt P18074

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ERCC2_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 0; PDBConstruct 1–760; UniProt 1–760

General transcription factor IIH subunit 1

Homo sapiens

UniProt P32780

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TF2H1_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain 1; PDBConstruct 1–548; UniProt 1–548

General transcription factor IIH subunit 4

Homo sapiens

UniProt Q92759

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TF2H4_HUMAN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain 2; PDBConstruct 1–462; UniProt 1–462

CDK-activating kinase assembly factor MAT1

Homo sapiens

UniProt P51948

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MAT1_HUMAN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain 3; PDBConstruct 1–309; UniProt 1–309

General transcription factor IIH subunit 3

Homo sapiens

UniProt Q13889

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TF2H3_HUMAN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain 4; PDBConstruct 1–308; UniProt 1–308

General transcription factor IIH subunit 5

Homo sapiens

UniProt Q6ZYL4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TF2H5_HUMAN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain 5; PDBConstruct 1–71; UniProt 1–71

General transcription factor IIH subunit 2

Homo sapiens

UniProt Q13888

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TF2H2_HUMAN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain 6; PDBConstruct 1–395; UniProt 1–395

General transcription and DNA repair factor IIH helicase subunit XPB

Homo sapiens

UniProt P19447

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ERCC3_HUMAN
Isoform —
PDB entities 8
Chains and sequence ranges Author chain 7; PDBConstruct 1–782; UniProt 1–782

Cyclin-dependent kinase 7

Homo sapiens

UniProt P50613

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CDK7_HUMAN
Isoform —
PDB entities 9
Chains and sequence ranges Author chain 8; PDBConstruct 1–346; UniProt 1–346

Cyclin-H

Homo sapiens

UniProt P51946

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CCNH_HUMAN
Isoform —
PDB entities 10
Chains and sequence ranges Author chain 9; PDBConstruct 1–323; UniProt 1–323

DNA-directed RNA polymerase subunit beta

OrganismNot specified

UniProt I3LGP4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name I3LGP4_PIG
Isoform —
PDB entities 12
Chains and sequence ranges Author chain B; PDBConstruct 1–1174; UniProt 78–1251

DNA-directed RNA polymerase II subunit RPB3

OrganismNot specified

UniProt I3LCH3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name I3LCH3_PIG
Isoform —
PDB entities 13
Chains and sequence ranges Author chain C; PDBConstruct 1–275; UniProt 1–275

RPOL4c domain-containing protein

OrganismNot specified

UniProt A0A287ADR4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A287ADR4_PIG
Isoform —
PDB entities 14
Chains and sequence ranges Author chain D; PDBConstruct 1–142; UniProt 43–184

DNA-directed RNA polymerase II subunit E

OrganismNot specified

UniProt I3LSI7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name I3LSI7_PIG
Isoform —
PDB entities 15
Chains and sequence ranges Author chain E; PDBConstruct 1–210; UniProt 1–210

DNA-directed RNA polymerase II subunit F

OrganismNot specified

UniProt F1SKN8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name F1SKN8_PIG
Isoform —
PDB entities 16
Chains and sequence ranges Author chain F; PDBConstruct 1–127; UniProt 1–127

DNA-directed RNA polymerase II subunit RPB7

OrganismNot specified

UniProt I3LJZ9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name I3LJZ9_PIG
Isoform —
PDB entities 17
Chains and sequence ranges Author chain G; PDBConstruct 1–172; UniProt 1–172

DNA-directed RNA polymerases I, II, and III subunit RPABC3

OrganismNot specified

UniProt A0A4X1ULF2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A4X1ULF2_PIG
Isoform —
PDB entities 18
Chains and sequence ranges Author chain H; PDBConstruct 1–150; UniProt 1–150

DNA-directed RNA polymerase II subunit RPB9

OrganismNot specified

UniProt P60899

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB9_PIG
Isoform —
PDB entities 19
Chains and sequence ranges Author chain I; PDBConstruct 1–125; UniProt 1–125

DNA-directed RNA polymerases I, II, and III subunit RPABC5

OrganismNot specified

UniProt A0A4X1VYD0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A4X1VYD0_PIG
Isoform —
PDB entities 20
Chains and sequence ranges Author chain J; PDBConstruct 1–67; UniProt 1–67

RNA_pol_L_2 domain-containing protein

OrganismNot specified

UniProt A0A4X1UK25

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A4X1UK25_PIG
Isoform —
PDB entities 21
Chains and sequence ranges Author chain K; PDBConstruct 1–117; UniProt 1–117

RNA polymerase II subunit K

OrganismNot specified

UniProt I3LN51

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name I3LN51_PIG
Isoform —
PDB entities 22
Chains and sequence ranges Author chain L; PDBConstruct 1–58; UniProt 1–58

Transcription initiation factor IIB

Homo sapiens

UniProt Q00403

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TF2B_HUMAN
Isoform —
PDB entities 23
Chains and sequence ranges Author chain M; PDBConstruct 1–316; UniProt 1–316

TATA-box-binding protein

Homo sapiens

UniProt P20226

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TBP_HUMAN
Isoform —
PDB entities 25
Chains and sequence ranges Author chain O; PDBConstruct 1–339; UniProt 1–339

General transcription factor IIF subunit 1

Homo sapiens

UniProt P35269

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name T2FA_HUMAN
Isoform —
PDB entities 26
Chains and sequence ranges Author chain Q; PDBConstruct 1–517; UniProt 1–517

General transcription factor IIF subunit 2

Homo sapiens

UniProt P13984

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name T2FB_HUMAN
Isoform —
PDB entities 27
Chains and sequence ranges Author chain R; PDBConstruct 1–249; UniProt 1–249

Transcription initiation factor IIA subunit 1

Homo sapiens

UniProt P52655

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TF2AA_HUMAN
Isoform —
PDB entities 29
Chains and sequence ranges Author chain U; PDBConstruct 1–376; UniProt 1–376

Transcription initiation factor IIA subunit 2

Homo sapiens

UniProt P52657

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name T2AG_HUMAN
Isoform —
PDB entities 30
Chains and sequence ranges Author chain V; PDBConstruct 1–109; UniProt 1–109

General transcription factor IIE subunit 1

Homo sapiens

UniProt P29083

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name T2EA_HUMAN
Isoform —
PDB entities 31
Chains and sequence ranges Author chain W; PDBConstruct 1–439; UniProt 1–439

Transcription initiation factor IIE subunit beta

Homo sapiens

UniProt P29084

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name T2EB_HUMAN
Isoform —
PDB entities 32
Chains and sequence ranges Author chain X; PDBConstruct 1–291; UniProt 1–291

Mediator of RNA polymerase II transcription subunit 6

Homo sapiens

UniProt O75586

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED6_HUMAN
Isoform —
PDB entities 35
Chains and sequence ranges Author chain a; PDBConstruct 1–246; UniProt 1–246

Mediator of RNA polymerase II transcription subunit 8

Homo sapiens

UniProt Q96G25

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED8_HUMAN
Isoform —
PDB entities 36
Chains and sequence ranges Author chain b; PDBConstruct 1–268; UniProt 1–268

Mediator of RNA polymerase II transcription subunit 11

Homo sapiens

UniProt Q9P086

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED11_HUMAN
Isoform —
PDB entities 37
Chains and sequence ranges Author chain c; PDBConstruct 1–117; UniProt 1–117

Mediator of RNA polymerase II transcription subunit 17

Homo sapiens

UniProt Q9NVC6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED17_HUMAN
Isoform —
PDB entities 38
Chains and sequence ranges Author chain d; PDBConstruct 1–651; UniProt 1–651

Mediator of RNA polymerase II transcription subunit 18

Homo sapiens

UniProt Q9BUE0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED18_HUMAN
Isoform —
PDB entities 39
Chains and sequence ranges Author chain e; PDBConstruct 1–208; UniProt 1–208

Mediator of RNA polymerase II transcription subunit 20

Homo sapiens

UniProt Q9H944

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED20_HUMAN
Isoform —
PDB entities 40
Chains and sequence ranges Author chain f; PDBConstruct 1–212; UniProt 1–212

Mediator of RNA polymerase II transcription subunit 22

Homo sapiens

UniProt Q15528

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED22_HUMAN
Isoform —
PDB entities 41
Chains and sequence ranges Author chain g; PDBConstruct 1–200; UniProt 1–200

Mediator of RNA polymerase II transcription subunit 4

Homo sapiens

UniProt Q9NPJ6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED4_HUMAN
Isoform —
PDB entities 42
Chains and sequence ranges Author chain h; PDBConstruct 1–270; UniProt 1–270

Mediator of RNA polymerase II transcription subunit 7

Homo sapiens

UniProt O43513

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED7_HUMAN
Isoform —
PDB entities 43
Chains and sequence ranges Author chain i; PDBConstruct 1–233; UniProt 1–233

Mediator of RNA polymerase II transcription subunit 9

Homo sapiens

UniProt Q9NWA0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED9_HUMAN
Isoform —
PDB entities 44
Chains and sequence ranges Author chain j; PDBConstruct 1–146; UniProt 1–146

Mediator of RNA polymerase II transcription subunit 10

Homo sapiens

UniProt Q9BTT4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED10_HUMAN
Isoform —
PDB entities 45
Chains and sequence ranges Author chain k; PDBConstruct 1–135; UniProt 1–135

Mediator of RNA polymerase II transcription subunit 14

Homo sapiens

UniProt O60244

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED14_HUMAN
Isoform —
PDB entities 46
Chains and sequence ranges Author chain l; PDBConstruct 1–1454; UniProt 1–1454

Mediator of RNA polymerase II transcription subunit 19

Homo sapiens

UniProt A0JLT2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED19_HUMAN
Isoform —
PDB entities 47
Chains and sequence ranges Author chain m; PDBConstruct 1–244; UniProt 1–244

Mediator of RNA polymerase II transcription subunit 21

Homo sapiens

UniProt Q13503

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED21_HUMAN
Isoform —
PDB entities 48
Chains and sequence ranges Author chain n; PDBConstruct 1–144; UniProt 1–144

Mediator of RNA polymerase II transcription subunit 31

Homo sapiens

UniProt Q9Y3C7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED31_HUMAN
Isoform —
PDB entities 49
Chains and sequence ranges Author chain o; PDBConstruct 1–131; UniProt 1–131

Mediator of RNA polymerase II transcription subunit 27

Homo sapiens

UniProt Q6P2C8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED27_HUMAN
Isoform —
PDB entities 50
Chains and sequence ranges Author chain p; PDBConstruct 1–311; UniProt 1–311

Mediator of RNA polymerase II transcription subunit 28

Homo sapiens

UniProt Q9H204

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) unassigned peptide (MED29 or MED30) × 1 Mediator of RNA polymerase II transcription subunit 30 × 1 (Q96HR3) unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED28_HUMAN
Isoform —
PDB entities 51
Chains and sequence ranges Author chain q; PDBConstruct 1–178; UniProt 1–178

Mediator of RNA polymerase II transcription subunit 30

Homo sapiens

UniProt Q96HR3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 56 DNA 2 TFIIH basal transcription factor complex helicase XPD subunit × 1 (P18074) General transcription factor IIH subunit 1 × 1 (P32780) General transcription factor IIH subunit 4 × 1 (Q92759) CDK-activating kinase assembly factor MAT1 × 1 (P51948) General transcription factor IIH subunit 3 × 1 (Q13889) General transcription factor IIH subunit 5 × 1 (Q6ZYL4) General transcription factor IIH subunit 2 × 1 (Q13888) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (P19447) Cyclin-dependent kinase 7 × 1 (P50613) Cyclin-H × 1 (P51946) DNA-directed RNA polymerase subunit × 1 DNA-directed RNA polymerase subunit beta × 1 (I3LGP4) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RPOL4c domain-containing protein × 1 (A0A287ADR4) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase II subunit F × 1 (F1SKN8) DNA-directed RNA polymerase II subunit RPB7 × 1 (I3LJZ9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A4X1ULF2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA_pol_L_2 domain-containing protein × 1 (A0A4X1UK25) RNA polymerase II subunit K × 1 (I3LN51) Transcription initiation factor IIB × 1 (Q00403) NT × 1 TATA-box-binding protein × 1 (P20226) General transcription factor IIF subunit 1 × 1 (P35269) General transcription factor IIF subunit 2 × 1 (P13984) TEMPLATE × 1 Transcription initiation factor IIA subunit 1 × 1 (P52655) Transcription initiation factor IIA subunit 2 × 1 (P52657) General transcription factor IIE subunit 1 × 1 (P29083) Transcription initiation factor IIE subunit beta × 1 (P29084) Unassigned peptide, likely TFIIE-beta × 1 Unassigned peptide, likely XPB × 1 Mediator of RNA polymerase II transcription subunit 6 × 1 (O75586) Mediator of RNA polymerase II transcription subunit 8 × 1 (Q96G25) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q9P086) Mediator of RNA polymerase II transcription subunit 17 × 1 (Q9NVC6) Mediator of RNA polymerase II transcription subunit 18 × 1 (Q9BUE0) Mediator of RNA polymerase II transcription subunit 20 × 1 (Q9H944) Mediator of RNA polymerase II transcription subunit 22 × 1 (Q15528) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q9NPJ6) Mediator of RNA polymerase II transcription subunit 7 × 1 (O43513) Mediator of RNA polymerase II transcription subunit 9 × 1 (Q9NWA0) Mediator of RNA polymerase II transcription subunit 10 × 1 (Q9BTT4) Mediator of RNA polymerase II transcription subunit 14 × 1 (O60244) Mediator of RNA polymerase II transcription subunit 19 × 1 (A0JLT2) Mediator of RNA polymerase II transcription subunit 21 × 1 (Q13503) Mediator of RNA polymerase II transcription subunit 31 × 1 (Q9Y3C7) Mediator of RNA polymerase II transcription subunit 27 × 1 (Q6P2C8) Mediator of RNA polymerase II transcription subunit 28 × 1 (Q9H204) unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED14) × 1 unassigned peptide (MED6) × 1 unassigned peptide (MED17) × 1 unassigned peptide (MED29 or MED30) × 1 unassigned peptide (MED29 or MED30) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 18 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED30_HUMAN
Isoform —
PDB entities 53
Chains and sequence ranges Author chain s; PDBConstruct 1–178; UniProt 1–178

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id7nvr
Deposition date deposition_date2021-03-15
Structure title titleHuman Mediator with RNA Polymerase II Pre-initiation complex
Keywords keywordsMediator complex, RNA polymerase II, TFIIH, Pre-initiation complex, TRANSCRIPTION; TRANSCRIPTION
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7nvr__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7nvr__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7nvr__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)91.54 Å
Rg (electron density)91.84 Å
Total Rg91.67 Å
Atom count96126
Residues11812
Excluded volume1710100 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7nvr__assembly_1__model_1 58-meric (58) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (61)

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7. Citations (1)