8xgc

Structure of yeast replisome associated with FACT and histone hexamer, Composite map

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

DNA replication licensing factor MCM2

OrganismNot specified

UniProt A0A6A5Q1S9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q1S9_YEASX
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 2; PDBConstruct 1–868; UniProt 1–868

DNA replication licensing factor MCM3

OrganismNot specified

UniProt P24279

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MCM3_YEAST
Isoform —
PDB entities 2
Chains and sequence ranges Author chain 3; PDBConstruct 1–971; UniProt 1–971

DNA replication licensing factor MCM4

OrganismNot specified

UniProt P30665

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MCM4_YEAST
Isoform —
PDB entities 3
Chains and sequence ranges Author chain 4; PDBConstruct 1–933; UniProt 1–933

Minichromosome maintenance protein 5

OrganismNot specified

UniProt P29496

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MCM5_YEAST
Isoform —
PDB entities 4
Chains and sequence ranges Author chain 5; PDBConstruct 1–775; UniProt 1–775

DNA replication licensing factor MCM6

OrganismNot specified

UniProt P53091

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MCM6_YEAST
Isoform —
PDB entities 5
Chains and sequence ranges Author chain 6; PDBConstruct 1–1017; UniProt 1–1017

DNA replication licensing factor MCM7

OrganismNot specified

UniProt A0A8H4BTB2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A8H4BTB2_YEASX
Isoform —
PDB entities 6
Chains and sequence ranges Author chain 7; PDBConstruct 1–845; UniProt 1–845

DNA polymerase epsilon catalytic subunit A

OrganismNot specified

UniProt P21951

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DPOE_YEAST
Isoform —
PDB entities 7
Chains and sequence ranges Author chain 8; PDBConstruct 1–2222; UniProt 1–2222

DNA polymerase epsilon subunit B

OrganismNot specified

UniProt P24482

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DPB2_YEAST
Isoform —
PDB entities 8
Chains and sequence ranges Author chain 9; PDBConstruct 1–689; UniProt 1–689

DNA replication complex GINS protein PSF1

OrganismNot specified

UniProt Q12488

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSF1_YEAST
Isoform —
PDB entities 9
Chains and sequence ranges Author chain A; PDBConstruct 1–208; UniProt 1–208

DNA replication complex GINS protein PSF3

OrganismNot specified

UniProt Q12146

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSF3_YEAST
Isoform —
PDB entities 11
Chains and sequence ranges Author chain C; PDBConstruct 1–194; UniProt 1–194

DNA replication complex GINS protein SLD5

OrganismNot specified

UniProt Q03406

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SLD5_YEAST
Isoform —
PDB entities 12
Chains and sequence ranges Author chain D; PDBConstruct 1–294; UniProt 1–294

Cell division control protein 45

OrganismNot specified

UniProt Q08032

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CDC45_YEAST
Isoform —
PDB entities 13
Chains and sequence ranges Author chain E; PDBConstruct 1–650; UniProt 1–650

DNA polymerase alpha-binding protein

OrganismNot specified

UniProt Q01454

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CTF4_YEAST
Isoform —
PDB entities 14
Chains and sequence ranges Author chain F; PDBConstruct 1–927; UniProt 1–927 Author chain G; PDBConstruct 1–927; UniProt 1–927 Author chain H; PDBConstruct 1–927; UniProt 1–927

Topoisomerase 1-associated factor 1

OrganismNot specified

UniProt P53840

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TOF1_YEAST
Isoform —
PDB entities 15
Chains and sequence ranges Author chain I; PDBConstruct 1–1238; UniProt 1–1238

Chromosome segregation in meiosis protein 3

OrganismNot specified

UniProt Q04659

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CSM3_YEAST
Isoform —
PDB entities 16
Chains and sequence ranges Author chain J; PDBConstruct 1–317; UniProt 1–317

Mediator of replication checkpoint protein 1

OrganismNot specified

UniProt P25588

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MRC1_YEAST
Isoform —
PDB entities 17
Chains and sequence ranges Author chain K; PDBConstruct 1–1096; UniProt 1–1096

FACT complex subunit SPT16

OrganismNot specified

UniProt P32558

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SPT16_YEAST
Isoform —
PDB entities 18
Chains and sequence ranges Author chain L; PDBConstruct 1–1035; UniProt 1–1035

FACT complex subunit POB3

OrganismNot specified

UniProt Q04636

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name POB3_YEAST
Isoform —
PDB entities 19
Chains and sequence ranges Author chain M; PDBConstruct 1–552; UniProt 1–552

Histone H3

OrganismNot specified

UniProt A0A6A5Q536

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q536_YEASX
Isoform —
PDB entities 20
Chains and sequence ranges Author chain N; PDBConstruct 1–136; UniProt 1–136 Author chain R; PDBConstruct 1–136; UniProt 1–136

Histone H4

OrganismNot specified

UniProt P02309

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H2A.1 × 1 (P04911) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name H4_YEAST
Isoform —
PDB entities 21
Chains and sequence ranges Author chain O; PDBConstruct 1–103; UniProt 1–103 Author chain S; PDBConstruct 1–103; UniProt 1–103

Histone H2A.1

OrganismNot specified

UniProt P04911

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2B.2 × 1 (P02294) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name H2A1_YEAST
Isoform —
PDB entities 22
Chains and sequence ranges Author chain P; PDBConstruct 1–132; UniProt 1–132

Histone H2B.2

OrganismNot specified

UniProt P02294

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 27 DNA 2 DNA replication licensing factor MCM2 × 1 (A0A6A5Q1S9) DNA replication licensing factor MCM3 × 1 (P24279) DNA replication licensing factor MCM4 × 1 (P30665) Minichromosome maintenance protein 5 × 1 (P29496) DNA replication licensing factor MCM6 × 1 (P53091) DNA replication licensing factor MCM7 × 1 (A0A8H4BTB2) DNA polymerase epsilon catalytic subunit A × 1 (P21951) DNA polymerase epsilon subunit B × 1 (P24482) DNA replication complex GINS protein PSF1 × 1 (Q12488) DNA replication complex GINS protein PSF2 × 1 DNA replication complex GINS protein PSF3 × 1 (Q12146) DNA replication complex GINS protein SLD5 × 1 (Q03406) Cell division control protein 45 × 1 (Q08032) DNA polymerase alpha-binding protein × 3 (Q01454) Topoisomerase 1-associated factor 1 × 1 (P53840) Chromosome segregation in meiosis protein 3 × 1 (Q04659) Mediator of replication checkpoint protein 1 × 1 (P25588) FACT complex subunit SPT16 × 1 (P32558) FACT complex subunit POB3 × 1 (Q04636) Histone H3 × 2 (A0A6A5Q536) Histone H4 × 2 (P02309) Histone H2A.1 × 1 (P04911) DNA (51-MER) × 1 DNA (39-MER) × 1 ZINC ION × 7 ADENOSINE-5'-DIPHOSPHATE × 5 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name H2B2_YEAST
Isoform —
PDB entities 23
Chains and sequence ranges Author chain Q; PDBConstruct 1–131; UniProt 1–131

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8xgc
Deposition date deposition_date2023-12-15
Structure title titleStructure of yeast replisome associated with FACT and histone hexamer, Composite map
Keywords keywordsReplisome, FACT, histone hexamer, REPLICATION; REPLICATION
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8xgc__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8xgc__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8xgc__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)82.37 Å
Rg (electron density)81.88 Å
Total Rg81.59 Å
Atom count82765
Residues10409
Excluded volume1469600 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8xgc__assembly_1__model_1 29-meric (29) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (27)

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7. Citations (1)