|
1FNT
CRYSTAL STRUCTURE OF THE 20S PROTEASOME FROM YEAST IN COMPLEX WITH THE PROTEASOME ACTIVATOR PA26 FROM TRYPANOSOME BRUCEI AT 3.2 ANGSTROMS RESOLUTION
提交 2000-08-23
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 42
PDB 声明:42-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 14
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;277 K;0.1 M NaHEPES, 40% MPD, 0.2 M NaCl, pH 7.5, VAPOR DIFFUSION, SITTING DROP
|
分辨率 3.20 Å
R-free 0.325
|
|
1G0U
A GATED CHANNEL INTO THE PROTEASOME CORE PARTICLE
提交 2000-10-09
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–250(250 aa)
链 R
1–250(250 aa)
|
未记录
|
MG MAGNESIUM ION × 20
|
X-RAY DIFFRACTION
X-ray结晶条件
hanging drop vapour-diffusion;pH 6.7;297 K;22mM Magnesium acetate, 4% Dimethylsulfoxide, 100mM morpholinoethanesulfonic acid, 11% methylpentanediol, pH 6.7, hanging drop vapour-diffusion, temperature 297K
|
分辨率 2.40 Å
R-free 0.303
|
|
1G65
Crystal structure of epoxomicin:20s proteasome reveals a molecular basis for selectivity of alpha,beta-epoxyketone proteasome inhibitors
提交 2000-11-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
MG MAGNESIUM ION × 10
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;298 K;0.1M Mes, pH 6.8
11% MPD
25mM MgAc2, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
|
分辨率 2.25 Å
R-free 0.336
|
|
1JD2
Crystal Structure of the yeast 20S Proteasome:TMC-95A complex: A non-covalent Proteasome Inhibitor
提交 2001-06-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
9–250(242 aa)
链 Y
9–250(242 aa)
|
未记录
|
MG MAGNESIUM ION × 10
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.4;293 K;MPD, MES, DMSO, magnesium Acetate, pH 6.4, VAPOR DIFFUSION, HANGING DROP at 293K
|
分辨率 3.00 Å
R-free 0.336
|
|
1RYP
CRYSTAL STRUCTURE OF THE 20S PROTEASOME FROM YEAST AT 2.4 ANGSTROMS RESOLUTION
提交 1997-02-26
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 E
9–250(242 aa)
链 S
9–250(242 aa)
|
突变:CHAINS H, V, T1A, CHAIN L, Z, K33R
突变:CHAINS H, V, T1A, CHAIN L, Z, K33R
|
MG MAGNESIUM ION × 20
|
X-RAY DIFFRACTION
X-ray结晶条件
pH 6.9;pH 6.9
|
分辨率 1.90 Å
R-free 0.330
|
|
1Z7Q
Crystal structure of the 20s proteasome from yeast in complex with the proteasome activator PA26 from Trypanosome brucei at 3.2 angstroms resolution
提交 2005-03-26
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 42
PDB 声明:42-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;298 K;0.1 M NaHEPES, 40% MPD, 0.2 M NACL, pH 7.50, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
分辨率 3.22 Å
R-free 0.308
|
|
2F16
Crystal structure of the yeast 20S proteasome in complex with bortezomib
提交 2005-11-14
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.4;293 K;12 % MPD
28mM MgAc2
50mM MES-NaOH, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.80 Å
R-free 0.264
|
|
2FAK
Crystal structure of Salinosporamide A in complex with the yeast 20S proteasome
提交 2005-12-07
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
SA1 (3AR,6R,6AS)-6-((S)-((S)-CYCLOHEX-2-ENYL)(HYDROXY)METHYL)-6A-METHYL-4-OXO-HEXAHYDRO-2H-FURO[3,2-C]PYRROLE-6-CARBALDEHYDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;Crystals appeared after one week; Crystallization conditions:
40mg/ml yeast 20S proteasome
0.1M MES; 28mM MgAc2, 12% MPD
6h crystal soak with 10mM SalA, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.80 Å
R-free 0.254
|
|
2GPL
TMC-95 based biphenyl-ether macrocycles: specific proteasome inhibitors
提交 2006-04-18
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
BIQ BENZYL [12-(2-AMINO-2-OXOETHYL)-4-NITRO-10,13-DIOXO-15-[(PROPYLAMINO)CARBONYL]-2-OXA-11,14-DIAZATRICYCLO[15 .2.2.1~3,7~]DOCOSA-1(19),3(22),4,6,17,20-HEXAEN-9-YL]CARBAMATE × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;20mM MgAc2; 0.1M MES, 12% MPD; crystals appeared within 7 days; crystal size 0.2 x 0.2 x 0.6 mm3, pH 6.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.81 Å
R-free 0.241
|
|
2Z5C
Crystal Structure of a Novel Chaperone Complex for Yeast 20S Proteasome Assembly
提交 2007-07-03
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 3
PDB 声明:trimeric
|
链 C
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;293 K;0.1M Tris-HCl, 8%(v/v) ethyleneglycol, 12%(w/v) PEG 8000, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.90 Å
R-free 0.283
|
|
2Z5C
Crystal Structure of a Novel Chaperone Complex for Yeast 20S Proteasome Assembly
提交 2007-07-03
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 3
PDB 声明:trimeric
|
链 F
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;293 K;0.1M Tris-HCl, 8%(v/v) ethyleneglycol, 12%(w/v) PEG 8000, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.90 Å
R-free 0.283
|
|
2ZCY
yeast 20S proteasome:syringolin A-complex
提交 2007-11-15
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
SRG (2S)-2-[[(2S)-1-[[(5S,8S,9E)-2,7-dioxo-5-propan-2-yl-1,6-diazacyclododeca-3,9-dien-8-yl]amino]-3-methyl-1-oxo-butan-2-yl]carbamoylamino]-3-methyl-butanoic acid × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;294 K;0.1M MES, 12% MPD, 30mM MgAc2, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 294K
|
分辨率 2.90 Å
R-free 0.245
|
|
3BDM
yeast 20S proteasome:glidobactin A-complex
提交 2007-11-15
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
GDT (2E,4E)-N-[(2S,3R)-3-hydroxy-1-[[(3Z,5S,8S,10S)-10-hydroxy-5-methyl-2,7-dioxo-1,6-diazacyclododec-3-en-8-yl]amino]-1-ox obutan-2-yl]dodeca-2,4-dienamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.6;294 K;100mM Mes, 14% MPD, 30mM MgAc2, pH 6.6, VAPOR DIFFUSION, HANGING DROP, temperature 294K
|
分辨率 2.70 Å
R-free 0.262
|
|
3DY3
Crystal structure of yeast 20S proteasome in complex with the epimer form of spirolactacystin
提交 2008-07-25
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
片段:UNP residues 9-250
链 R
9–250(242 aa)
片段:UNP residues 9-250
|
未记录
|
SLR (3R,4R)-3-hydroxy-2-[(1S)-1-hydroxy-2-methylpropyl]-4-methyl-5-oxo-D-proline × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;298 K;0.1 M MES, 10 % MPD, 20 mM MgAc2, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 2.81 Å
R-free 0.245
|
|
3DY4
Crystal structure of yeast 20S proteasome in complex with spirolactacystin
提交 2008-07-25
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
片段:UNP residues 9-250
链 R
9–250(242 aa)
片段:UNP residues 9-250
|
未记录
|
SLA Omuralide, open form × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;298 K;0.1 M MES, 10 % MPD, 20 mM MgAc2, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 2.80 Å
R-free 0.256
|
|
3E47
Crystal Structure of the Yeast 20S Proteasome in Complex with Homobelactosin C
提交 2008-08-10
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
片段:UNP residues 9-250
链 R
9–250(242 aa)
片段:UNP residues 9-250
|
未记录
|
ESY benzyl N-[(benzyloxy)carbonyl]-L-alanyl-N~6~-[(2R,3S,4S)-3-formyl-2-hydroxy-4-methylhexanoyl]-L-lysinate × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;298 K;20% MPD, 0.1M MES, 30mM MgAc2, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 3.00 Å
R-free 0.245
|
|
3GPJ
Crystal structure of the yeast 20S proteasome in complex with syringolin B
提交 2009-03-23
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
片段:sequence database residues 9-250
链 R
9–250(242 aa)
片段:sequence database residues 9-250
|
未记录
|
SY2 N-{[(1S)-2-methyl-1-{[(5S,8S)-5-(1-methylethyl)-2,7-dioxo-1,6-diazacyclododec-3-en-8-yl]carbamoyl}propyl]carbamoyl}-L-valine × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;12% MPD, 0.1M MES, pH 6.7, 20mM MgAc2, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.70 Å
R-free 0.264
|
|
3GPT
Crystal structure of the yeast 20S proteasome in complex with Salinosporamide derivatives: slow substrate ligand
提交 2009-03-23
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
片段:sequence database residues 9-250
链 R
9–250(242 aa)
片段:sequence database residues 9-250
|
未记录
|
GPT (2R,3S,4R)-2-[(S)-(1S)-cyclohex-2-en-1-yl(hydroxy)methyl]-4-(2-fluoroethyl)-3-hydroxy-3-methyl-5-oxopyrrolidine-2-carbaldehyde × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;12% MPD, 0.1M MES, 20mM MgAc2, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.41 Å
R-free 0.245
|
|
3GPW
Crystal structure of the yeast 20S proteasome in complex with Salinosporamide derivatives: irreversible inhibitor ligand
提交 2009-03-23
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
片段:sequence database residues 9-250
链 R
9–250(242 aa)
片段:sequence database residues 9-250
|
未记录
|
SA1 (3AR,6R,6AS)-6-((S)-((S)-CYCLOHEX-2-ENYL)(HYDROXY)METHYL)-6A-METHYL-4-OXO-HEXAHYDRO-2H-FURO[3,2-C]PYRROLE-6-CARBALDEHYDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.7;12% MPD, 0.1M MES, 20mM MgAc2, pH 6.7, VAPOR DIFFUSION, HANGING DROP
|
分辨率 2.50 Å
R-free 0.255
|
|
3HYE
Crystal structure of 20S proteasome in complex with hydroxylated salinosporamide
提交 2009-06-22
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
HYE (2R,3S,4R)-2-[(S)-(1S)-cyclohex-2-en-1-yl(hydroxy)methyl]-3-hydroxy-4-(2-hydroxyethyl)-3-methyl-5-oxopyrrolidine-2-carbaldehyde × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.6;293 K;Crystals grew within one week under 0.1M MES/HCl,pH 6.6, 30mM MgAc2 and 15% MPD, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.50 Å
R-free 0.242
|
|
3JCO
Structure of yeast 26S proteasome in M1 state derived from Titan dataset
提交 2016-01-06
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
1–260(260 aa)
链 e
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
50mM Tris pH 7.5, 100mM NaCl, 5mM MgCl2, 2mM ATP;pH 7.5;50mM Tris pH 7.5, 100mM NaCl, 5mM MgCl2, 2mM ATP
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 4.80 Å
|
|
3JCP
Structure of yeast 26S proteasome in M2 state derived from Titan dataset
提交 2016-01-06
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
1–260(260 aa)
链 e
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
50mM Tris pH 7.5, 100mM NaCl, 5mM MgCl2, 2mM ATP;pH 7.5;50mM Tris pH 7.5, 100mM NaCl, 5mM MgCl2, 2mM ATP
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 4.60 Å
|
|
3MG0
Structure of yeast 20S proteasome with bortezomib
提交 2010-04-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;100 mM MES, 40 mM MgOAc, 15% 2-methyl-2,4-pentanediol (MPD), 10 mM EDTA, pH 7.0, vapor diffusion, hanging drop, temperature 293K
|
分辨率 2.68 Å
R-free 0.253
|
|
3MG4
Structure of yeast 20S proteasome with Compound 1
提交 2010-04-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
MG MAGNESIUM ION × 10
LXT (2S)-2-amino-N-[(1S)-1-({(1S)-1-[(4-methylbenzyl)carbamoyl]-3-phenylpropyl}carbamoyl)-3-phenylpropyl]-4-phenylbutanamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;100 mM MES, 40 mM MgOAc, 15% 2-methyl-2,4-pentanediol (MPD), 10 mM EDTA, pH 7.0, vapor diffusion, hanging drop, temperature 293K
|
分辨率 3.11 Å
R-free 0.250
|
|
3MG6
Structure of yeast 20S open-gate proteasome with Compound 6
提交 2010-04-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–250(250 aa)
链 R
1–250(250 aa)
|
未记录
|
MG MAGNESIUM ION × 10
LZT N~2~-{[(1S)-6-methoxy-3-oxo-2,3-dihydro-1H-inden-1-yl]acetyl}-N-{(1S)-1-[(4-methylbenzyl)carbamoyl]-3-phenylpropyl}-L-threoninamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;100 mM MES, 40 mM MgOAc, 15% 2-methyl-2,4-pentanediol (MPD), 10 mM EDTA, pH 7.0, vapor diffusion, hanging drop, temperature 293K
|
分辨率 2.60 Å
R-free 0.249
|
|
3MG7
Structure of yeast 20S open-gate proteasome with Compound 8
提交 2010-04-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–250(250 aa)
链 R
1–250(250 aa)
|
未记录
|
MG MAGNESIUM ION × 10
L2T 4-(benzyloxy)-N-[(1S,2R)-2-hydroxy-1-({(1S)-1-[(2-methylbenzyl)carbamoyl]-3-phenylpropyl}carbamoyl)propyl]benzamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;100 mM MES, 40 mM MgOAc, 15% 2-methyl-2,4-pentanediol (MPD), 10 mM EDTA, pH 7.0, vapor diffusion, hanging drop, temperature 293K
|
分辨率 2.78 Å
R-free 0.259
|
|
3MG8
Structure of yeast 20S open-gate proteasome with Compound 16
提交 2010-04-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–250(250 aa)
链 R
1–250(250 aa)
|
未记录
|
MG MAGNESIUM ION × 10
L3T N-(2,2-dimethylpropyl)-N~2~-[1H-indol-3-yl(oxo)acetyl]-L-asparaginyl-N-(2-methylbenzyl)-3-pyridin-4-yl-L-alaninamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;100 mM MES, 40 mM MgOAc, 15% 2-methyl-2,4-pentanediol (MPD), 10 mM EDTA, pH 7.0, vapor diffusion, hanging drop, temperature 293K
|
分辨率 2.59 Å
R-free 0.252
|
|
3NZJ
Crystal structure of yeast 20S proteasome in complex with ligand 2a
提交 2010-07-16
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.9;293 K;1000 mM MES / HCl, 6.8, 12% MPD, 20 mM MgAc2, pH 6.9, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.40 Å
R-free 0.249
|
|
3NZW
Crystal structure of the yeast 20S proteasome in complex with 2b
提交 2010-07-17
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;100 mM MES/HCl, 6.8, 20mM MgAc2, 12% MPD, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.50 Å
R-free 0.240
|
|
3NZX
Crystal structure of the yeast 20S proteasome in complex with ligand 2c
提交 2010-07-17
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;100 mM MES/Hcl, pH 6.8, 20 mM MGAc2, 12 % MPD, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.70 Å
R-free 0.248
|
|
3OEU
Structure of yeast 20S open-gate proteasome with Compound 24
提交 2010-08-13
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
OEU N-{(2S)-1-[(2-chlorobenzyl)amino]-1-oxo-4-phenylbutan-2-yl}-N~2~-[3-(2-methylphenyl)propanoyl]-L-threoninamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;100 mM MES, pH 7.0, 40 mM MgOAc, 15% 2-methyl-2,4-pentanediol (MPD), 10 mM EDTA, vapor diffusion, hanging drop, temperature 293K
|
分辨率 2.60 Å
R-free 0.249
|
|
3OEV
Structure of yeast 20S open-gate proteasome with Compound 25
提交 2010-08-13
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
3OE 4-(benzyloxy)-N-[(2S,3R)-3-hydroxy-1-{[(2S)-1-{[(3-methylthiophen-2-yl)methyl]amino}-1-oxo-4-phenylbutan-2-yl]amino}-1-oxobutan-2-yl]benzamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;100 mM MES, pH 7.0, 40 mM MgOAc, 15% 2-methyl-2,4-pentanediol (MPD), 10 mM EDTA, vapor diffusion, hanging drop, temperature 293K
|
分辨率 2.85 Å
R-free 0.257
|
|
3OKJ
Alpha-keto-aldehyde binding mechanism reveals a novel lead structure motif for proteasome inhibition
提交 2010-08-25
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
片段:sequence database residues 9-250
链 R
9–250(242 aa)
片段:sequence database residues 9-250
|
未记录
|
EP9 N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S,3S)-3-hydroxy-1-(4-hydroxyphenyl)-4-oxobutan-2-yl]-L-leucinamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.9;293 K;Crystalls appeared during one week using 100mM MES, 20mM MG2Ac, 12% MPD, pH 6.9, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.70 Å
R-free 0.259
|
|
3SDI
Structure of yeast 20S open-gate proteasome with Compound 20
提交 2011-06-09
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 20
3SD N~4~-(2,2-dimethylpropyl)-N~1~-{(2S)-1-[(4-methylbenzyl)amino]-1-oxo-4-phenylbutan-2-yl}-N~2~-[(5-methyl-1,2-oxazol-3-yl)carbonyl]-L-aspartamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;100 mM MES, pH 7.0, 40 mM MgOAc, 15% 2-methyl-2,4-pentanediol (MPD), 10 mM EDTA, vapor diffusion, hanging drop, temperature 293K
|
分辨率 2.65 Å
R-free 0.253
|
|
3SDK
Structure of yeast 20S open-gate proteasome with Compound 34
提交 2011-06-09
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
P3N N-[(2S)-3-(3-tert-butyl-1,2,4-oxadiazol-5-yl)-1-({(2S)-1-[(4-methylbenzyl)amino]-1-oxo-4-phenylbutan-2-yl}amino)-1-oxopropan-2-yl]-5-methyl-1,2-oxazole-3-carboxamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;100 mM MES, pH 7.0, 40 mM MgOAc, 15% 2-methyl-2,4-pentanediol (MPD), 10 mM EDTA, vapor diffusion, hanging drop, temperature 293K
|
分辨率 2.70 Å
R-free 0.259
|
|
3SHJ
Proteasome in complex with hydroxyurea derivative HU10
提交 2011-06-16
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
H10 1-hydroxy-1-[(2R)-4-{3-[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-yloxy]phenyl}but-3-yn-2-yl]urea × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;20 mM magnesium acetate, 11% PEG, 100 mM MES/NaOH, pH 7.0, crystals grow to their final size within a week, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.80 Å
R-free 0.266
|
|
3TDD
Crystal structure of yeast CP in complex with Belactosin C
提交 2011-08-10
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
BFO benzyl N-[(naphthalen-2-ylmethoxy)carbonyl]-L-alanyl-N~5~-[(2R,3S,4S)-3-formyl-2-hydroxy-4-methylhexanoyl]-L-ornithinate × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;100 mM MES, 12% MPD, 20 mM MgAc2, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.70 Å
R-free 0.236
|
|
3UN4
Yeast 20S proteasome in complex with PR-957 (morpholine)
提交 2011-11-15
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;100 mM MES, 12% MPD, 20 mM MgAc2, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 3.40 Å
R-free 0.219
|
|
3UN8
Yeast 20S proteasome in complex with PR-957 (epoxide)
提交 2011-11-15
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
049 2-(acetylamino)-4,5-anhydro-1,2-dideoxy-4-methyl-1-phenyl-D-xylitol × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;100 mM MES, 12% MPD, 20 mM MgAc2, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.70 Å
R-free 0.240
|
|
3WXR
Yeast 20S proteasome with a mutation of alpha7 subunit
提交 2014-08-06
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;14% MPD, 0.1M MES, 50mM Magnesium acetate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 3.15 Å
R-free 0.242
|
|
4CR2
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
提交 2014-02-25
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 33
PDB 声明:33-meric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.1
cryo-EM玻璃化条件
冷冻剂 ETHANE;VITRIFICATION 1 -- CRYOGEN- ETHANE, INSTRUMENT- HOMEMADE PLUNGER,
|
分辨率 7.70 Å
|
|
4CR3
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
提交 2014-02-25
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 33
PDB 声明:33-meric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.1
cryo-EM玻璃化条件
冷冻剂 ETHANE;VITRIFICATION 1 -- CRYOGEN- ETHANE, INSTRUMENT- HOMEMADE PLUNGER,
|
分辨率 9.30 Å
|
|
4CR4
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
提交 2014-02-25
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 33
PDB 声明:33-meric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.1
cryo-EM玻璃化条件
冷冻剂 ETHANE;VITRIFICATION 1 -- CRYOGEN- ETHANE, INSTRUMENT- HOMEMADE PLUNGER,
|
分辨率 8.80 Å
|
|
4EU2
Crystal structure of 20s proteasome with novel inhibitor K-7174
提交 2012-04-25
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 E
9–250(242 aa)
片段:UNP RESIDUES 9-250
链 S
9–250(242 aa)
片段:UNP RESIDUES 9-250
|
未记录
|
WPI 1,4-bis[(4E)-5-(3,4,5-trimethoxyphenyl)pent-4-en-1-yl]-1,4-diazepane × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.2;293 K;4.5% (v/v) 2-methyl1-2,4-pentanediol(MPD), 36mM magnesium acetate, 90mM MES pH7.2, 10%(v/v) DMSO, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.51 Å
R-free 0.255
|
|
4FZC
20S yeast proteasome in complex with cepafungin I
提交 2012-07-06
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;100 mM MES; 20 mM MgAc2; 12% MPD, pH 6.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.80 Å
R-free 0.244
|
|
4FZG
20S yeast proteasome in complex with glidobactin
提交 2012-07-06
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;100 mM MES; 20 mM MgAc2; 12% , pH 6.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 3.00 Å
R-free 0.226
|
|
4G4S
Structure of Proteasome-Pba1-Pba2 Complex
提交 2012-07-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 E
1–260(260 aa)
|
非标准单体:是(mmCIF未提供具体位点)
|
MG MAGNESIUM ION × 16
LDZ N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-4-methyl-1-oxopentan-2-yl]-L-leucinamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;0.1 M sodium citrate, 18-20% PEG 3000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 2.49 Å
R-free 0.232
|
|
4GK7
yeast 20S proteasome in complex with the Syringolin-Glidobactin chimera
提交 2012-08-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;0.1M MES, 20mM MgAc2; 12% MPD, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.80 Å
R-free 0.241
|
|
4HNP
Crystal structure of yeast 20S proteasome in complex with vinylketone carmaphycin analogue VNK1
提交 2012-10-20
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
ONK N-hexanoyl-L-valyl-N~1~-[(3S,4S)-3-hydroxy-2,6-dimethylhept-1-en-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide × 2
VNK N-hexanoyl-L-valyl-N~1~-[(3S,4S)-3-hydroxy-2,6-dimethylheptan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 7.5;297 K;30 mM of magnesium acetate, 100 mM of MES (pH 7.2) and 12% of MPD, vapor diffusion, temperature 297K
|
分辨率 2.80 Å
R-free 0.239
|
|
4HRC
Crystal structure of yeast 20S proteasome in complex with epoxyketone carmaphycin analogue 3
提交 2012-10-27
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
OV2 N-hexanoyl-L-valyl-N~1~-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 7.5;297 K;30 mM of magnesium acetate, 100 mM of MES (pH 7.2) and 12% of MPD, vapor diffusion, temperature 297K
|
分辨率 2.80 Å
R-free 0.243
|
|
4HRD
Crystal structure of yeast 20S proteasome in complex with the natural product carmaphycin A
提交 2012-10-27
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
OV1 N-[(2S)-1-({(2S)-1-{[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]amino}-4-[(R)-methylsulfinyl]-1-oxobutan-2-yl}amino)-3-methyl-1-oxobutan-2-yl]hexanamide × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
pH 7.5;297 K;30 mM of magnesium acetate, 100 mM of MES (pH 7.2) and 12% of MPD, vapor diffusion, temperature 297K
|
分辨率 2.80 Å
R-free 0.239
|
|
4INR
Yeast 20S proteasome in complex with the vinyl sulfone LU102
提交 2013-01-06
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
1G1 N3Phe-Leu-Leu-Phe(4-NH2CH2)-methyl vinyl sulfone, bound form × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM magnesium acetate, 0.1 M MES, 12% MPD, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.70 Å
R-free 0.231
|
|
4INT
Yeast 20S proteasome in complex with the vinyl sulfone LU122
提交 2013-01-06
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
1G5 HMB-Val-Ser-Phe(4-NH2CH2)-methyl vinyl sulfone, bound form × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM magnesium acetate, 0.1 M MES, 12% MPD, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.90 Å
R-free 0.230
|
|
4INU
Yeast 20S proteasome in complex with the vinyl sulfone LU112
提交 2013-01-06
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
1G6 N3Phe-Phe(4-NH2CH2)-Leu-Phe(4-NH2CH2)-methyl vinyl sulfone, bound form × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.9;293 K;20 mM magnesium acetate, 0.1 M MES, 12% MPD, pH 6.9, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 3.10 Å
R-free 0.238
|
|
4J70
Yeast 20S proteasome in complex with the belactosin derivative 3e
提交 2013-02-12
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
1KR benzyl [(2S)-1-({(2R)-1-[(1S,2S)-2-{[(2R,3S,4S)-3-formyl-2-hydroxy-4-methylhexanoyl]amino}cyclopropyl]-4-phenylbutan-2-yl}amino)-1-oxopropan-2-yl]carbamate × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.9;293 K;20 mM magnesium acetate, 0.1 M MES, 12% MPD, pH 6.9, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.80 Å
R-free 0.224
|
|
4JSQ
Yeast 20S proteasome in complex with the dimerized linear mimetic of TMC-95A - yCP:4e
提交 2013-03-22
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;20mM MgAc2, 0.1M MES, 12% MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.80 Å
R-free 0.241
|
|
4JSU
Yeast 20S proteasome in complex with the dimerized linear mimetic of TMC-95A - yCP:3a
提交 2013-03-22
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;20mM MgAc2, 0.1M MES, 12% MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.90 Å
R-free 0.227
|
|
4JT0
Yeast 20S proteasome in complex with the dimerized linear mimetic of TMC-95A - yCP:4a
提交 2013-03-22
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
0L1 hexanedioic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;20mM MgAc2, 0.1M MES, 12% MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 3.10 Å
R-free 0.223
|
|
4LQI
Yeast 20S Proteasome in complex with Vibralactone
提交 2013-07-18
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
9–250(242 aa)
链 R
9–250(242 aa)
|
未记录
|
1Y9 vibralactone, bound form × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;20 mM magnesium acetate, 100 mM MES, 12% MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.70 Å
R-free 0.227
|
|
4LTC
Crystal structure of yeast 20S proteasome in complex with enone carmaphycin analogue 6
提交 2013-07-23
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
EC6 N-hexanoyl-L-valyl-N~1~-[(4S,5S,6R)-5-hydroxy-2,6-dimethyloctan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 7.5;297 K;30 mM of magnesium acetate, 100 mM of MES (pH 7.2) and 12% of MPD, vapor diffusion, temperature 297K
|
分辨率 2.50 Å
R-free 0.233
|
|
4NNN
yCP in complex with MG132
提交 2013-11-18
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
ALD N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAc2, 13% MPD, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.50 Å
R-free 0.249
|
|
4NNW
yCP in complex with Z-Leu-Leu-Leu-ketoaldehyde
提交 2013-11-19
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
2MK N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2R,3S)-1,2-dihydroxy-5-methylhexan-3-yl]-L-leucinamide × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAc2, 100 mM MES, 13% MPD
, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.60 Å
R-free 0.208
|
|
4NO1
yCP in complex with Z-Leu-Leu-Leu-B(OH)2
提交 2013-11-19
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CIX N-[(benzyloxy)carbonyl]-L-leucyl-N-[(1R)-1-(dihydroxyboranyl)-3-methylbutyl]-L-leucinamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAc2, 100 mM MES, 13% MPD, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.50 Å
R-free 0.214
|
|
4NO6
yCP in complex with Z-Leu-Leu-Leu-vinylsulfone
提交 2013-11-19
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
2M1 N-[(benzyloxy)carbonyl]-L-leucyl-N-[(3S)-5-methyl-1-(methylsulfonyl)hexan-3-yl]-L-leucinamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAc2, 100 mM MES, 13% MPD, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 3.00 Å
R-free 0.207
|
|
4NO8
yCP in complex with Z-Leu-Leu-Leu-ketoamide
提交 2013-11-19
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
2LV N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S,3S)-2-hydroxy-5-methyl-1-oxo-1-(phenylamino)hexan-3-yl]-L-leucinamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAc2, 100 mM MES, 13% MPD, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.70 Å
R-free 0.217
|
|
4NO9
yCP in complex with Z-Leu-Leu-Leu-epoxyketone
提交 2013-11-19
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
2L0 N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-leucinamide × 3
2LR N-[(benzyloxy)carbonyl]-L-leucyl-N-{(1R,2S)-1-hydroxy-4-methyl-1-[(2R)-2-methyloxiran-2-yl]pentan-2-yl}-L-leucinamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAc2, 100 mM MES, 13% MPD, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.90 Å
R-free 0.203
|
|
4Q1S
Yeast 20S proteasome in Complex with Kendomycin
提交 2014-04-04
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
2YD (5R,6R,7S,8R,9R,12S,13E,16S,18S,19R,20aR)-4,7,19-trihydroxy-2,6,8,12,14,16,18-heptamethyl-6,7,8,9,10,11,12,15,16,17,18,19,20,20a-tetradecahydro-1,19:5,9-diepoxybenzo[18]annulen-3(5H)-one × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;20 mM MgAc2, 100 mM MES, 13% MPD, pH 6,8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.60 Å
R-free 0.224
|
|
4QBY
yCP in complex with BOC-ALA-ALA-ALA-CHO
提交 2014-05-09
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
片段:alpha subunit
链 R
1–260(260 aa)
片段:alpha subunit
|
突变:wild type
突变:wild type
|
MG MAGNESIUM ION × 11
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAc2, 100 mM MES, 13% MPD
, pH 6.8 , VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 3.00 Å
R-free 0.207
|
|
4QLQ
yCP in complex with tripeptidic epoxyketone inhibitor 8
提交 2014-06-13
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
38N N-(morpholin-4-ylacetyl)-L-alanyl-N-[(2S,4R)-1-cyclohexyl-5-hydroxy-4-methyl-3-oxopentan-2-yl]-O-methyl-L-tyrosinamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20mM MgAc2, 100mM MES, 13% MPD, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.40 Å
R-free 0.215
|
|
4QLS
yCP in complex with tripeptidic epoxyketone inhibitor 11
提交 2014-06-13
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
37Y N-(morpholin-4-ylacetyl)-D-alanyl-N-[(2S,4R)-1-cyclohexyl-5-hydroxy-4-methyl-3-oxopentan-2-yl]-O-methyl-L-tyrosinamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20mM MGAC2, 13% MPD, PH 6.8, 100mM MES, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.80 Å
R-free 0.199
|
|
4QLT
yCP in complex with tripeptidic epoxyketone inhibitor 2 (PR924)
提交 2014-06-13
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
39V N-[(3-methyl-1H-inden-2-yl)carbonyl]-D-alanyl-N-[(2S,4R)-5-hydroxy-4-methyl-3-oxo-1-phenylpentan-2-yl]-L-tryptophanamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MGAC2, 13% MPD, PH 6.8, 100 mM MES, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.80 Å
R-free 0.202
|
|
4QLU
yCP in complex with tripeptidic epoxyketone inhibitor 9
提交 2014-06-13
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
38X N-[(3-methyl-1H-inden-2-yl)carbonyl]-D-alanyl-N-[(2S,4R)-1-cyclohexyl-5-hydroxy-4-methyl-3-oxopentan-2-yl]-L-tryptophanamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20mM MGAC2, 13% MPD, 100mM MES, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.80 Å
R-free 0.248
|
|
4QLV
yCP in complex with tripeptidic epoxyketone inhibitor 17
提交 2014-06-13
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
39Q N-(morpholin-4-ylacetyl)-D-alanyl-N-[(2S,4R)-5-hydroxy-4-methyl-3-oxo-1-phenylpentan-2-yl]-O-methyl-L-tyrosinamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20mM MGAC2, 13% MPD, 100mM MES, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.90 Å
R-free 0.209
|
|
4QUX
yCP beta5-A49T-mutant
提交 2014-07-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 3.00 Å
R-free 0.197
|
|
4QUY
yCP beta5-A49S-mutant
提交 2014-07-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.80 Å
R-free 0.226
|
|
4QV0
yCP beta5-A49T-A50V-double mutant
提交 2014-07-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 6
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 3.10 Å
R-free 0.197
|
|
4QV1
yCP beta5-M45A mutant
提交 2014-07-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.50 Å
R-free 0.216
|
|
4QV3
yCP beta5-M45V mutant
提交 2014-07-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 3.00 Å
R-free 0.211
|
|
4QV4
yCP beta5-M45T mutant
提交 2014-07-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.70 Å
R-free 0.213
|
|
4QV5
yCP beta5-M45I mutant
提交 2014-07-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.70 Å
R-free 0.217
|
|
4QV6
yCP beta5-A49V mutant
提交 2014-07-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.80 Å
R-free 0.231
|
|
4QV7
yCP beta5-A50V mutant
提交 2014-07-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.60 Å
R-free 0.214
|
|
4QV8
yCP beta5-C52F mutant
提交 2014-07-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.90 Å
R-free 0.221
|
|
4QV9
yCP beta5-C63F mutant
提交 2014-07-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.60 Å
R-free 0.218
|
|
4QVL
yCP in complex with bortezomib
提交 2014-07-15
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.80 Å
R-free 0.215
|
|
4QVM
yCP beta5-M45A mutant in complex with bortezomib
提交 2014-07-15
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.80 Å
R-free 0.215
|
|
4QVN
yCP beta5-M45V mutant in complex with bortezomib
提交 2014-07-15
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.90 Å
R-free 0.213
|
|
4QVP
yCP beta5-M45T mutant in complex with bortezomib
提交 2014-07-15
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.30 Å
R-free 0.225
|
|
4QVQ
yCP beta5-M45I mutant in complex with bortezomib
提交 2014-07-15
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.60 Å
R-free 0.219
|
|
4QVV
yCP beta5-A49V mutant in complex with bortezomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.80 Å
R-free 0.235
|
|
4QVW
yCP beta5-A49S-mutant in complex with bortezomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 3.00 Å
R-free 0.209
|
|
4QVY
yCP beta5-A49T-mutant in complex with bortezomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.51 Å
R-free 0.219
|
|
4QW0
yCP beta5-A49T-A50V-double mutant in complex with bortezomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.90 Å
R-free 0.211
|
|
4QW1
yCP beta5-A50V mutant in complex with bortezomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.90 Å
R-free 0.216
|
|
4QW3
yCP beta5-C63F mutant in complex with bortezomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 5
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.90 Å
R-free 0.217
|
|
4QW4
yCP in complex with carfilzomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.80 Å
R-free 0.216
|
|
4QW5
yCP beta5-M45A mutant in complex with carfilzomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 5
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 3.00 Å
R-free 0.201
|
|
4QW6
yCP beta5-M45V mutant in complex with carfilzomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 6
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.90 Å
R-free 0.206
|
|
4QW7
yCP beta5-M45T mutant in complex with carfilzomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.70 Å
R-free 0.226
|
|
4QWF
yCP beta5-M45I mutant in complex with carfilzomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 3.00 Å
R-free 0.203
|
|
4QWG
yCP beta5-A49V mutant in complex with carfilzomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 6
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.60 Å
R-free 0.243
|
|
4QWI
yCP beta5-A49S-mutant in complex with carfilzomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.60 Å
R-free 0.214
|
|
4QWJ
yCP beta5-A49T-mutant in complex with carfilzomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.90 Å
R-free 0.228
|
|
4QWK
yCP beta5-A49T-A50V-double mutant in complex with carfilzomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.80 Å
R-free 0.209
|
|
4QWL
yCP beta5-A50V mutant in complex with carfilzomib
提交 2014-07-16
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.60 Å
R-free 0.219
|
|
4QWR
yCP beta5-C52F mutant in complex with carfilzomib
提交 2014-07-17
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.90 Å
R-free 0.209
|
|
4QWS
yCP beta5-C63F mutant in complex with carfilzomib
提交 2014-07-17
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
MG MAGNESIUM ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 3.00 Å
R-free 0.214
|
|
4QWU
yCP beta5-C52F mutant in complex with bortezomib
提交 2014-07-17
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 3.00 Å
R-free 0.218
|
|
4QWX
yCP in complex with the epoxyketone inhibitor ONX 0914
提交 2014-07-17
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
NA SODIUM ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K, pH 6.8
|
分辨率 2.90 Å
R-free 0.212
|
|
4QXJ
yCP beta5-M45A mutant in complex with the epoxyketone inhibitor ONX 0914
提交 2014-07-21
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 6
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.80 Å
R-free 0.222
|
|
4QZ0
yCP beta5-M45V mutant in complex with the epoxyketone inhibitor ONX 0914
提交 2014-07-27
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 6
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 3.00 Å
R-free 0.201
|
|
4QZ1
yCP beta5-M45T mutant in complex with the epoxyketone inhibitor ONX 0914
提交 2014-07-27
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
MG MAGNESIUM ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 3.00 Å
R-free 0.216
|
|
4QZ2
yCP beta5-M45I mutant in complex with the epoxyketone inhibitor ONX 0914
提交 2014-07-27
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.70 Å
R-free 0.219
|
|
4QZ3
yCP beta5-A49V mutant in complex with the epoxyketone inhibitor ONX 0914
提交 2014-07-27
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.80 Å
R-free 0.207
|
|
4QZ4
yCP beta5-A49S mutant in complex with the epoxyketone inhibitor ONX 0914
提交 2014-07-27
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 3.00 Å
R-free 0.218
|
|
4QZ5
yCP beta5-A49T-mutant in complex with ONX 0914
提交 2014-07-27
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.80 Å
R-free 0.224
|
|
4QZ6
yCP beta5-A49T-A50V double mutant in complex with the epoxyketone inhibitor ONX 0914
提交 2014-07-27
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.90 Å
R-free 0.204
|
|
4QZ7
yCP beta5-A50V mutant in complex with the epoxyketone inhibitor ONX 0914
提交 2014-07-27
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.80 Å
R-free 0.213
|
|
4QZW
yCP beta5-C52F mutant in complex with the epoxyketone inhibitor ONX 0914
提交 2014-07-29
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 3.00 Å
R-free 0.218
|
|
4QZX
yCP beta5-C63F mutant in complex with the epoxyketone inhibitor ONX 0914
提交 2014-07-29
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.60 Å
R-free 0.223
|
|
4QZZ
yCP in complex with Omuralide
提交 2014-07-29
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
SLA Omuralide, open form × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.90 Å
R-free 0.208
|
|
4R00
yCP beta5-C52F mutant in complex with Omuralide
提交 2014-07-29
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 5
SLA Omuralide, open form × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.80 Å
R-free 0.210
|
|
4R02
yCP in complex with BSc4999 (alpha-Keto Phenylamide)
提交 2014-07-29
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
3E5 N-[(benzyloxy)carbonyl]-L-leucyl-N-{(2S,3S)-1-[(2,4-dimethylphenyl)amino]-2-hydroxy-5-methyl-1-oxohexan-3-yl}-L-leucinamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.50 Å
R-free 0.207
|
|
4R17
Ligand-induced aziridine-formation at subunit beta5 of the yeast 20S proteasome
提交 2014-08-04
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
3K4 (2S,3S)-3-methylaziridine-2-carboxylic acid × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.10 Å
R-free 0.198
|
|
4R18
Ligand-induced Lys33-Thr1 crosslinking at subunit beta5 of the yeast 20S proteasome
提交 2014-08-04
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
ABA ALPHA-AMINOBUTYRIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.40 Å
R-free 0.195
|
|
4RUR
Yeast 20S proteasome in complex with the alkaloid indolo-phakellin (4)
提交 2014-11-21
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
3WE (2E,3aR,14aS)-9-bromo-2-imino-1,2,3,5,6,14a-hexahydro-4H,8H-imidazo[4',5':5,6]pyrrolo[1',2':4,5]pyrazino[1,2-a]indol-8-one × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;297 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K, temperature 297K
|
分辨率 2.50 Å
R-free 0.213
|
|
4V7O
Proteasome Activator Complex
提交 2009-12-22
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 AJ
1–250(250 aa)
链 AV
1–250(250 aa)
|
未记录
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;VAPOR DIFFUSION, HANGING DROP
|
分辨率 3.00 Å
R-free 0.250
|
|
4V7O
Proteasome Activator Complex
提交 2009-12-22
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 BE
1–250(250 aa)
链 BS
1–250(250 aa)
|
未记录
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;VAPOR DIFFUSION, HANGING DROP
|
分辨率 3.00 Å
R-free 0.250
|
|
4X6Z
Yeast 20S proteasome in complex with PR-VI modulator
提交 2014-12-09
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 9
GOL GLYCEROL × 38
MG MAGNESIUM ION × 56
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.2;293 K;30mM magnesium acetate, 12% MPD, 0.1M MES pH 7.2
|
分辨率 2.70 Å
R-free 0.222
|
|
4Y69
Yeast 20S proteasome in complex with Ac-PAD-ep
提交 2015-02-12
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR
DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.90 Å
R-free 0.217
|
|
4Y6A
Yeast 20S proteasome beta2-H114D mutant in complex with Ac-PAD-ep
提交 2015-02-12
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8, VAPOR
DIFFUSION, HANGING DROP, TEMPERATURE 293K
|
分辨率 2.60 Å
R-free 0.232
|
|
4Y6V
Yeast 20S proteasome in complex with Ac-PAE-ep
提交 2015-02-13
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.209
|
|
4Y6Z
Yeast 20S proteasome in complex with Ac-PAL-ep
提交 2015-02-13
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.216
|
|
4Y70
Yeast 20S proteasome in complex with Ac-LAV-ep
提交 2015-02-13
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.40 Å
R-free 0.226
|
|
4Y74
Yeast 20S proteasome in complex with Ac-LAL-ep
提交 2015-02-13
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.214
|
|
4Y75
Yeast 20S proteasome in complex with Ac-PAF-ep
提交 2015-02-13
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.215
|
|
4Y77
Yeast 20S proteasome in complex with Ac-LAF-ep
提交 2015-02-13
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.50 Å
R-free 0.215
|
|
4Y78
Yeast 20S proteasome in complex with Ac-LAD-ep
提交 2015-02-13
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.219
|
|
4Y7W
Yeast 20S proteasome in complex with Ac-LAE-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.50 Å
R-free 0.217
|
|
4Y7X
Yeast 20S proteasome in complex with Ac-PAA-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.225
|
|
4Y7Y
Yeast 20S proteasome in complex with Ac-LAA-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.40 Å
R-free 0.235
|
|
4Y80
Yeast 20S proteasome in complex with Ac-LAI-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.50 Å
R-free 0.219
|
|
4Y81
Yeast 20S proteasome in complex with Ac-PAY-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.234
|
|
4Y82
Yeast 20S proteasome in complex with Ac-LAY-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.207
|
|
4Y84
Yeast 20S proteasome in complex with N3-A(4,4-F2P)nLL-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.203
|
|
4Y8G
Yeast 20S proteasome in complex with N3-APnLL-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.208
|
|
4Y8H
Yeast 20S proteasome in complex with N3-APAL-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.50 Å
R-free 0.214
|
|
4Y8I
Yeast 20S proteasome in complex with Ac-PLL-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.220
|
|
4Y8J
Yeast 20S proteasome in complex with Ac-LLL-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 5
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.224
|
|
4Y8K
Yeast 20S proteasome in complex with H-APLL-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.236
|
|
4Y8L
Yeast 20S proteasome in complex with Ac-APLL-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.40 Å
R-free 0.224
|
|
4Y8M
Yeast 20S proteasome beta7-delta7_Cter mutant
提交 2015-02-16
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.218
|
|
4Y8N
Yeast 20S proteasome beta7-delta7_Cter mutant in complex with Ac-PAE-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.215
|
|
4Y8O
Yeast 20S proteasome beta7-delta7_Cter mutant in complex with Ac-PAF-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.231
|
|
4Y8P
Yeast 20S proteasome beta7-delta7_Cter mutant in complex with Ac-PAL-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.220
|
|
4Y8Q
Yeast 20S proteasome beta7-delta7_Cter mutant in complex with Ac-PAY-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.228
|
|
4Y8R
Yeast 20S proteasome beta2-H116D mutant
提交 2015-02-16
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.222
|
|
4Y8S
Yeast 20S proteasome beta2-H116D mutant in complex with Ac-LAE-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.221
|
|
4Y8T
Yeast 20S proteasome beta2-H116D mutant in complex with Ac-PAE-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.209
|
|
4Y8U
Yeast 20S proteasome beta2-H116D mutant in complex with Ac-PAD-ep
提交 2015-02-16
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 6
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.214
|
|
4Y9Y
Yeast 20S proteasome beta2-H116E mutant
提交 2015-02-17
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.203
|
|
4Y9Z
Yeast 20S proteasome beta2-H116E mutant in complex with Ac-LAE-ep
提交 2015-02-17
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.218
|
|
4YA0
Yeast 20S proteasome beta2-H116E mutant in complex with Ac-PAE-ep
提交 2015-02-17
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.216
|
|
4YA1
Yeast 20S proteasome beta2-H116N mutant
提交 2015-02-17
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
CL CHLORIDE ION × 4
MG MAGNESIUM ION × 9
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.218
|
|
4YA2
Yeast 20S proteasome beta2-H116N mutant in complex with Ac-LAE-ep
提交 2015-02-17
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.205
|
|
4YA3
Yeast 20S proteasome beta2-H116N mutant in complex with Ac-PAE-ep
提交 2015-02-17
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.220
|
|
4YA4
Yeast 20S proteasome beta2-H114D mutant
提交 2015-02-17
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.232
|
|
4YA5
Yeast 20S proteasome beta2-H114D mutant in complex with Ac-PAE-ep
提交 2015-02-17
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.50 Å
R-free 0.242
|
|
4YA7
Yeast 20S proteasome beta2-H114D mutant in complex with Ac-LAE-ep
提交 2015-02-17
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.237
|
|
4YA9
Yeast 20S proteasome beta2-H114D mutant in complex with Ac-LAD-ep
提交 2015-02-17
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
CL CHLORIDE ION × 1
K POTASSIUM ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.241
|
|
4Z1L
Yeast 20S proteasome in complex with belactosin C derivative 3
提交 2015-03-27
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
4KF (2S,3S)-2-{(1R)-2-[(3,5-dimethoxybenzyl)amino]-1-hydroxy-2-oxoethyl}-3-methylpentanoic acid × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.00 Å
R-free 0.229
|
|
5A5B
Structure of the 26S proteasome-Ubp6 complex
提交 2015-06-17
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 35
PDB 声明:35-meric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM玻璃化条件
冷冻剂 ETHANE;VITRIFICATION 1 -- CRYOGEN- ETHANE, INSTRUMENT- HOMEMADE PLUNGER,
|
分辨率 9.50 Å
|
|
5AHJ
Yeast 20S proteasome in complex with Macyranone A
提交 2015-02-06
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
7IM N-[(2S)-3-{[(1S)-1-carboxy-2-phenylethyl]amino}-2-methyl-3-oxopropanoyl]-L-threonyl-N-[(3S,4S)-1,3-dihydroxy-6-methylheptan-4-yl]-L-allothreoninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
pH 6.8;100 MM MES, PH 7.0 12% MPD 20 MM MGAC2
|
分辨率 2.80 Å
R-free 0.219
|
|
5BOU
Yeast 20S proteasome in complex with a beta1 / beta2 specific non-peptidic sulfonamide Ligand
提交 2015-05-27
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
4UC N-[4-(acetylsulfamoyl)phenyl]-2-(4-ethoxyphenyl)quinoline-4-carboxamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.214
|
|
5BXL
Yeast 20S proteasome beta2-G170A mutant
提交 2015-06-09
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.214
|
|
5BXN
Yeast 20S proteasome beta2-G170A mutant in complex with Bortezomib
提交 2015-06-09
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.218
|
|
5CGF
Yeast 20S proteasome beta5-G48C mutant
提交 2015-07-09
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.201
|
|
5CGG
Yeast 20S proteasome beta5-G48C mutant in complex with alpha-chloroacetamide 1
提交 2015-07-09
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.231
|
|
5CGH
Yeast 20S proteasome beta5-G48C mutant in complex with alpha-chloroacetamide 5
提交 2015-07-09
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
54L pent-4-ynoic acid × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.50 Å
R-free 0.227
|
|
5CGI
Yeast 20S proteasome beta5-G48C mutant in complex with ONX 0914
提交 2015-07-09
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
NA SODIUM ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.206
|
|
5CZ4
Yeast 20S proteasome at 2.3 A resolution
提交 2015-07-31
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.30 Å
R-free 0.228
|
|
5CZ5
Yeast 20S proteasome beta1-T1A mutant in complex with Carfilzomib
提交 2015-07-31
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.222
|
|
5CZ6
Yeast 20S proteasome beta5-T1A mutant in complex with Syringolin A, propeptide expressed in trans
提交 2015-07-31
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
SRG (2S)-2-[[(2S)-1-[[(5S,8S,9E)-2,7-dioxo-5-propan-2-yl-1,6-diazacyclododeca-3,9-dien-8-yl]amino]-3-methyl-1-oxo-butan-2-yl]carbamoylamino]-3-methyl-butanoic acid × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.226
|
|
5CZ7
Yeast 20S proteasome beta5-T1A beta5-K81R double mutant in complex with Bortezomib, propeptide expressed in cis
提交 2015-07-31
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.50 Å
R-free 0.215
|
|
5CZ8
Yeast 20S proteasome beta5-L(-49)S-K33A mutant in complex with Carfilzomib
提交 2015-07-31
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.215
|
|
5CZ9
Yeast 20S proteasome beta5-D17N mutant in complex with Carfilzomib; Propeptide expressed in trans
提交 2015-07-31
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.223
|
|
5CZA
Yeast 20S proteasome beta5-D166N mutant
提交 2015-07-31
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.50 Å
R-free 0.224
|
|
5D0S
Yeast 20S proteasome beta5-D166N mutant in complex with Carfilzomib
提交 2015-08-03
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.50 Å
R-free 0.237
|
|
5D0T
Yeast 20S proteasome beta5-D166N mutant in complex with MG132
提交 2015-08-03
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
CL CHLORIDE ION × 4
ALD N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.218
|
|
5D0V
Yeast 20S proteasome beta5-T1C mutant in complex with Carfilzomib
提交 2015-08-03
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.220
|
|
5D0W
Yeast 20S proteasome beta5-T1S mutant
提交 2015-08-03
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.203
|
|
5D0X
Yeast 20S proteasome beta5-T1S mutant in complex with Bortezomib
提交 2015-08-03
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.224
|
|
5D0Z
Yeast 20S proteasome beta5-T1S mutant in complex with Carfilzomib
提交 2015-08-03
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.207
|
|
5DKI
Yeast 20S proteasome in complex with alkyne-PI
提交 2015-09-03
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 5
5BZ [(1~{R})-1-[[(2~{S})-2-(hex-5-ynoylamino)-3-phenyl-propanoyl]amino]-3-methyl-butyl]boronic acid × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.2;293 K;30 mM MgAc2, 100 mM MES, 10% MPD
|
分辨率 2.80 Å
R-free 0.219
|
|
5DKJ
Yeast 20S proteasome in complex with octreotide-PI
提交 2015-09-03
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
5BY {2-[2-(2-{4-[(1E)-4-{[(2S)-1-{[(1R)-1-(dihydroxyboranyl)-3-methylbutyl]amino}-1-oxo-3-phenylpropan-2-yl]amino}-4-oxobut-1-en-1-yl]-1H-1,2,3-triazol-1-yl}ethoxy)ethoxy]ethoxy}acetic acid × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.2;293 K;30 mM MgAC2, 10% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.210
|
|
5FG7
Yeast 20S proteasome beta2-T1A mutant
提交 2015-12-20
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;298 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.231
|
|
5FG9
Yeast 20S proteasome beta2-T(-2)V mutant
提交 2015-12-20
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;298 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.230
|
|
5FGA
Yeast 20S proteasome beta5-K33A mutant (propeptide expressed in trans)
提交 2015-12-20
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.214
|
|
5FGD
Yeast 20S proteasome beta5-H(-2)L-T1A double mutant in complex with Carfilzomib
提交 2015-12-20
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 5
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.208
|
|
5FGE
Yeast 20S proteasome beta5-H(-2)T-T1A double mutant in complex with Carfilzomib
提交 2015-12-20
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.214
|
|
5FGF
Yeast 20S proteasome beta5-H(-2)A-T1A-K81R triple mutant in complex with Carfilzomib
提交 2015-12-20
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.214
|
|
5FGG
Yeast 20S proteasome beta5-L(-49S)_D17N double mutant in complex with Carfilzomib
提交 2015-12-20
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.208
|
|
5FGH
Yeast 20S proteasome beta5-K33A mutant (propeptide expressed in trans) in complex with MG132
提交 2015-12-20
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
ALD N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.206
|
|
5FGI
Yeast 20S proteasome beta1-T1A beta2-T1A double mutant in complex with Carfilzomib
提交 2015-12-20
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 6
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.210
|
|
5FHS
Yeast 20S proteasome beta5-K33A mutant (propeptide expressed in trans) in complex with Carfilzomib
提交 2015-12-22
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 5
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.212
|
|
5JHR
Yeast 20S proteasome in complex with the peptidic epoxyketone inhibitor 27
提交 2016-04-21
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 3
6KF (2S)-2-azido-N-[(2S)-3-(biphenyl-4-yl)-1-{[(2S)-1-{[(2S,3S,4R)-3,5-dihydroxy-4-methylpentan-2-yl]amino}-1-oxo-3-phenylpropan-2-yl]amino}-1-oxopropan-2-yl]-3-phenylpropanamide (non-preferred name) × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.206
|
|
5JHS
Yeast 20S proteasome in complex with the peptidic epoxyketone inhibitor 15
提交 2016-04-21
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
6KG Nalpha-[(2S)-2-{[(2S)-2-azido-3-phenylpropanoyl]amino}-4-cyclohexylbutanoyl]-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 3
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.00 Å
R-free 0.203
|
|
5L52
Yeast 20S proteasome in complex with epoxyketone inhibitor 14
提交 2016-05-27
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
6N5 ~{N}-[(2~{S})-1-[[(2~{S})-3-(4-methoxyphenyl)-1-[[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]amino]-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-methyl-5~{H}-indene-2-carboxamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;292 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.210
|
|
5L54
Yeast 20S proteasome in complex with epoxyketone inhibitor 16
提交 2016-05-27
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
79P (2~{S})-3-(1~{H}-indol-3-yl)-~{N}-[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]-2-[[(2~{R})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.206
|
|
5L55
Yeast 20S proteasome in complex with epoxyketone inhibitor 18
提交 2016-05-27
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
CL CHLORIDE ION × 3
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
6NV ~{N}-[(2~{R})-1-[[(2~{S})-3-(4-methoxyphenyl)-1-[[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]amino]-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-methyl-5~{H}-indene-2-carboxamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.225
|
|
5L5A
Yeast 20S proteasome with human beta5i (1-138; R57T)
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.40 Å
R-free 0.219
|
|
5L5B
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133)
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.211
|
|
5L5D
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with ONX 0914
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.221
|
|
5L5E
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with carfilzomib
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.227
|
|
5L5F
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with bortezomib
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.50 Å
R-free 0.228
|
|
5L5H
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with PR-924
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
39V N-[(3-methyl-1H-inden-2-yl)carbonyl]-D-alanyl-N-[(2S,4R)-5-hydroxy-4-methyl-3-oxo-1-phenylpentan-2-yl]-L-tryptophanamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.216
|
|
5L5I
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 9
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
38X N-[(3-methyl-1H-inden-2-yl)carbonyl]-D-alanyl-N-[(2S,4R)-1-cyclohexyl-5-hydroxy-4-methyl-3-oxopentan-2-yl]-L-tryptophanamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.210
|
|
5L5J
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 14
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
6N5 ~{N}-[(2~{S})-1-[[(2~{S})-3-(4-methoxyphenyl)-1-[[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]amino]-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-methyl-5~{H}-indene-2-carboxamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.200
|
|
5L5O
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 16
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
79P (2~{S})-3-(1~{H}-indol-3-yl)-~{N}-[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]-2-[[(2~{R})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.214
|
|
5L5P
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 17
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
79L (2~{S})-3-(4-methoxyphenyl)-~{N}-[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]-2-[[(2~{R})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.207
|
|
5L5Q
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with epoxyketone 18
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
6NV ~{N}-[(2~{R})-1-[[(2~{S})-3-(4-methoxyphenyl)-1-[[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]amino]-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-methyl-5~{H}-indene-2-carboxamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.210
|
|
5L5R
Yeast 20S proteasome with human beta5i (1-138;V31M) and human beta6 (97-111; 118-133)
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.221
|
|
5L5S
Yeast 20S proteasome with human beta5i (1-138; V31M) and human beta6 (97-111; 118-133) in complex with PR-924
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
39V N-[(3-methyl-1H-inden-2-yl)carbonyl]-D-alanyl-N-[(2S,4R)-5-hydroxy-4-methyl-3-oxo-1-phenylpentan-2-yl]-L-tryptophanamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.211
|
|
5L5T
Yeast 20S proteasome with human beta5i (1-138; V31M) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 16
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
79P (2~{S})-3-(1~{H}-indol-3-yl)-~{N}-[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]-2-[[(2~{R})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.195
|
|
5L5U
Yeast 20S proteasome with human beta5i (1-138; V31M) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 17
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.211
|
|
5L5V
'Yeast 20S proteasome with human beta5i (1-138; V31M) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 18
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
6NV ~{N}-[(2~{R})-1-[[(2~{S})-3-(4-methoxyphenyl)-1-[[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]amino]-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-methyl-5~{H}-indene-2-carboxamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.208
|
|
5L5W
Yeast 20S proteasome with human beta5c (1-138) and human beta6 (97-111; 118-133)
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
CL CHLORIDE ION × 4
MG MAGNESIUM ION × 12
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.212
|
|
5L5X
Yeast 20S proteasome with human beta5c (1-138) and human beta6 (97-111; 118-133) in complex with ONX 0914
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.215
|
|
5L5Y
Yeast 20S proteasome with human beta5c (1-138) and human beta6 (97-111; 118-133) in complex with carfilzomib
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.207
|
|
5L5Z
Yeast 20S proteasome with human beta5c (1-138) and human beta6 (97-111; 118-133) in complex with bortezomib
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.212
|
|
5L60
Yeast 20S proteasome with human beta5c (1-138) and human beta6 (97-111; 118-133) in complex with PR-924
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
39V N-[(3-methyl-1H-inden-2-yl)carbonyl]-D-alanyl-N-[(2S,4R)-5-hydroxy-4-methyl-3-oxo-1-phenylpentan-2-yl]-L-tryptophanamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.212
|
|
5L61
Yeast 20S proteasome with human beta5c (1-138) and human beta6 (99-132) in complex with epoxyketone inhibitor 14
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
6N5 ~{N}-[(2~{S})-1-[[(2~{S})-3-(4-methoxyphenyl)-1-[[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]amino]-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-methyl-5~{H}-indene-2-carboxamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.205
|
|
5L62
Yeast 20S proteasome with human beta5c (1-138) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 16
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 12
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
79P (2~{S})-3-(1~{H}-indol-3-yl)-~{N}-[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]-2-[[(2~{R})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.204
|
|
5L63
Yeast 20S proteasome with human beta5c (1-138) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 17
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.212
|
|
5L64
Yeast 20S proteasome with human beta5c (1-138) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 18
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
6NV ~{N}-[(2~{R})-1-[[(2~{S})-3-(4-methoxyphenyl)-1-[[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]amino]-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-methyl-5~{H}-indene-2-carboxamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.223
|
|
5L65
Yeast 20S proteasome with mouse beta5i (1-138) and mouse beta6 (97-111; 118-133) in complex with carfilzomib
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
3BV N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.201
|
|
5L66
Yeast 20S proteasome with mouse beta5i (1-138) and mouse beta6 (97-111; 118-133) in complex with bortezomib
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.210
|
|
5L67
Yeast 20S proteasome with mouse beta5i (1-138) and mouse beta6 (97-111; 118-133) in complex with PR-924
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
39V N-[(3-methyl-1H-inden-2-yl)carbonyl]-D-alanyl-N-[(2S,4R)-5-hydroxy-4-methyl-3-oxo-1-phenylpentan-2-yl]-L-tryptophanamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.213
|
|
5L68
Yeast 20S proteasome with mouse beta5i (1-138) and mouse beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 14
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
6N5 ~{N}-[(2~{S})-1-[[(2~{S})-3-(4-methoxyphenyl)-1-[[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]amino]-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-methyl-5~{H}-indene-2-carboxamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.223
|
|
5L69
Yeast 20S proteasome with mouse beta5i (1-138) and mouse beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 16
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 3
79P (2~{S})-3-(1~{H}-indol-3-yl)-~{N}-[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]-2-[[(2~{R})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.217
|
|
5L6A
Yeast 20S proteasome with mouse beta5i (1-138) and mouse beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 17
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
79L (2~{S})-3-(4-methoxyphenyl)-~{N}-[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]-2-[[(2~{R})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.213
|
|
5L6B
Yeast 20S proteasome with mouse beta5i (1-138) and mouse beta6 (97-111; 118-133) in complex with ONX 0914
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
04C 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.221
|
|
5L6C
Yeast 20S proteasome with mouse beta5i (1-138) and mouse beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 18
提交 2016-05-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
6NV ~{N}-[(2~{R})-1-[[(2~{S})-3-(4-methoxyphenyl)-1-[[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]amino]-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-methyl-5~{H}-indene-2-carboxamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.217
|
|
5LAI
Ligand-induced aziridine-formation at the yeast proteasomal subunit beta5 by sulfonate esters
提交 2016-06-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
3K4 (2S,3S)-3-methylaziridine-2-carboxylic acid × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAc2, 13% MPD
|
分辨率 2.50 Å
R-free 0.219
|
|
5LAJ
Ligand-induced Lys33-Thr1 crosslinking at the yeast proteasomal subunit beta5 by sulfonate esters
提交 2016-06-14
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MGAC2, 13% MPD
|
分辨率 2.90 Å
R-free 0.201
|
|
5LTT
Yeast 20S proteasome with human beta5i (1-138; R57T)in complex with PR-924
提交 2016-09-07
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
39V N-[(3-methyl-1H-inden-2-yl)carbonyl]-D-alanyl-N-[(2S,4R)-5-hydroxy-4-methyl-3-oxo-1-phenylpentan-2-yl]-L-tryptophanamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.247
|
|
5M2B
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with thiazole based inhibitor Ro19
提交 2016-10-12
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
7DX (2~{S})-2-cyclohexyl-4-oxidanylidene-4-[[7-(4-phenyl-1,3-thiazol-2-yl)quinolin-2-yl]amino]butanoic acid × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.218
|
|
5MP9
26S proteasome in presence of ATP (s1)
提交 2016-12-16
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 E
1–260(260 aa)
链 e
1–260(260 aa)
|
未记录
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 5
MG MAGNESIUM ION × 6
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 4.10 Å
|
|
5MPA
26S proteasome in presence of ATP (s2)
提交 2016-12-16
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 E
1–260(260 aa)
链 e
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 6
ATP ADENOSINE-5'-TRIPHOSPHATE × 5
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 4.50 Å
|
|
5MPB
26S proteasome in presence of AMP-PNP (s3)
提交 2016-12-16
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
1–260(260 aa)
链 e
1–260(260 aa)
|
未记录
|
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5
MG MAGNESIUM ION × 6
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 7.80 Å
|
|
5MPC
26S proteasome in presence of BeFx (s4)
提交 2016-12-16
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 48
PDB 声明:48-meric
|
链 E
1–260(260 aa)
链 e
1–260(260 aa)
|
未记录
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
MG MAGNESIUM ION × 6
ADP ADENOSINE-5'-DIPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 7.70 Å
|
|
5NIF
Yeast 20S proteasome in complex with Blm-pep activator
提交 2017-03-23
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
CL CHLORIDE ION × 12
MG MAGNESIUM ION × 8
EDO 1,2-ETHANEDIOL × 16
GOL GLYCEROL × 7
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;0.1M MES pH 6.5, 35mM magnesium acetate, 13% MPD
|
分辨率 3.00 Å
R-free 0.227
|
|
5WVI
The resting state of yeast proteasome
提交 2016-12-25
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
1–260(260 aa)
链 m
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 6.30 Å
|
|
5WVK
Yeast proteasome-ADP-AlFx
提交 2016-12-25
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
1–260(260 aa)
链 m
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 4.20 Å
|
|
6EF0
Yeast 26S proteasome bound to ubiquitinated substrate (1D* motor state)
提交 2018-08-15
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 14
PDB 声明:tetradecameric
|
链 E
1–249(249 aa)
|
未记录
|
ADP ADENOSINE-5'-DIPHOSPHATE × 3
ATP ADENOSINE-5'-TRIPHOSPHATE × 3
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.6
cryo-EM玻璃化条件
冷冻剂 ETHANE;specimens were manually blotted with Whatman #1 filter paper
|
分辨率 4.43 Å
|
|
6EF1
Yeast 26S proteasome bound to ubiquitinated substrate (5D motor state)
提交 2018-08-15
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 14
PDB 声明:tetradecameric
|
链 E
9–250(242 aa)
|
未记录
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
ADP ADENOSINE-5'-DIPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.6
cryo-EM玻璃化条件
冷冻剂 ETHANE;specimens were manually blotted with Whatman #1 filter paper
|
分辨率 4.73 Å
|
|
6EF2
Yeast 26S proteasome bound to ubiquitinated substrate (5T motor state)
提交 2018-08-15
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 14
PDB 声明:tetradecameric
|
链 E
2–248(247 aa)
|
未记录
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
ADP ADENOSINE-5'-DIPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.6
cryo-EM玻璃化条件
冷冻剂 ETHANE;specimens were manually blotted with Whatman #1 filter paper
|
分辨率 4.27 Å
|
|
6EF3
Yeast 26S proteasome bound to ubiquitinated substrate (4D motor state)
提交 2018-08-15
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 24
PDB 声明:24-meric
|
链 E
1–260(260 aa)
|
未记录
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
ADP ADENOSINE-5'-DIPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.6
cryo-EM玻璃化条件
冷冻剂 ETHANE;specimens were manually blotted with Whatman #1 filter paper
|
分辨率 4.17 Å
|
|
6FVT
26S proteasome, s1 state
提交 2018-03-05
|
构建体不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
7–250(244 aa)
链 e
7–250(244 aa)
|
未记录
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 5
MG MAGNESIUM ION × 6
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 4.10 Å
|
|
6FVU
26S proteasome, s2 state
提交 2018-03-05
|
构建体不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
2–250(249 aa)
链 e
2–250(249 aa)
|
未记录
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 5
MG MAGNESIUM ION × 6
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 4.50 Å
|
|
6FVV
26S proteasome, s3 state
提交 2018-03-05
|
构建体不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
7–250(244 aa)
链 e
7–250(244 aa)
|
未记录
|
ADP ADENOSINE-5'-DIPHOSPHATE × 2
MG MAGNESIUM ION × 6
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 5.40 Å
|
|
6FVW
26S proteasome, s4 state
提交 2018-03-05
|
构建体不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
6–250(245 aa)
链 e
6–250(245 aa)
|
未记录
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
MG MAGNESIUM ION × 6
ADP ADENOSINE-5'-DIPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 4.50 Å
|
|
6FVX
26S proteasome, s5 state
提交 2018-03-05
|
构建体不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
7–250(244 aa)
链 e
7–250(244 aa)
|
未记录
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 5
MG MAGNESIUM ION × 6
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 4.90 Å
|
|
6FVY
26S proteasome, s6 state
提交 2018-03-05
|
构建体不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
6–250(245 aa)
链 e
6–250(245 aa)
|
未记录
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
MG MAGNESIUM ION × 6
ADP ADENOSINE-5'-DIPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 6.10 Å
|
|
6G7F
Yeast 20S proteasome in complex with Cystargolide B
提交 2018-04-05
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
EPW Cystargolide B- bound form × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8
|
分辨率 2.70 Å
R-free 0.214
|
|
6G8M
Yeast 20S proteasome in complex with Cystargolide B Derivative 1
提交 2018-04-09
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
EQE (2~{S},3~{R})-4-[[(2~{S})-3-methyl-1-[[(2~{S})-3-methyl-1-oxidanylidene-1-phenylmethoxy-butan-2-yl]amino]-1-oxidanylidene-butan-2-yl]amino]-3-oxidanyl-4-oxidanylidene-2-propan-2-yl-butanoic acid × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8
|
分辨率 2.70 Å
R-free 0.214
|
|
6G8N
Yeast 20S proteasome in complex with Cystargolide B Derivative 2
提交 2018-04-09
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
EQB (2~{S},3~{S})-3-methyl-2-[(1~{R})-2-[[(2~{S})-3-methyl-1-[[(2~{S})-3-methyl-1-oxidanylidene-1-phenylmethoxy-butan-2-yl] amino]-1-oxidanylidene-butan-2-yl]amino]-1-oxidanyl-2-oxidanylidene-ethyl]pentanoic acid × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 MM MGAC2, 13% MPD, PH 6.8
|
分辨率 3.00 Å
R-free 0.238
|
|
6GOP
Yeast 20S Proteasome in complex with Homosalinosporamide A
提交 2018-06-01
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
F6K Homosalinosporamide A - bound form × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.233
|
|
6H39
Yeast 20S proteasome in complex with the peptidic non-covalent binding inhibitor RTS-V5
提交 2018-07-17
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
FGY N-(2,2-dimethylpropyl)-N~2~-[4-(hydroxycarbamoyl)benzene-1-carbonyl]-L-asparaginyl-N-benzyl-L-alaninamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.50 Å
R-free 0.217
|
|
6HTB
Yeast 20S proteasome with human beta2c (S171G)
提交 2018-10-03
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.220
|
|
6HTC
Yeast 20S proteasome with human beta2c (S171G) in complex with ONX 0914
提交 2018-10-03
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
GQK (2~{S})-3-(4-methoxyphenyl)-~{N}-[(2~{S},3~{R})-4-methyl-3,4-bis(oxidanyl)-1-phenyl-pentan-2-yl]-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.218
|
|
6HTD
Yeast 20S proteasome with human beta2c (S171G) in complex with 4
提交 2018-10-03
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GQH (2~{S})-~{N}-[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide × 4
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.00 Å
R-free 0.201
|
|
6HTP
Yeast 20S proteasome with human beta2c (S171G) in complex with 7
提交 2018-10-04
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GQQ ~{N}-[(2~{S})-1-[[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]pyrazine-2-carboxamide × 4
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.00 Å
R-free 0.206
|
|
6HTR
Yeast 20S proteasome with human beta2c (S171G) in complex with 13
提交 2018-10-04
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
GQT (2~{S})-~{N}-[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-propan-2-yl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.225
|
|
6HUB
Yeast 20S proteasome with human beta2c (S171G) in complex with 16
提交 2018-10-05
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GRW (2~{S})-~{N}-[(2~{S},3~{R})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-2-[[(2~{R})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide × 4
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.212
|
|
6HUC
Yeast 20S proteasome with human beta2c (S171G) in complex with 18
提交 2018-10-05
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GRT (2~{S})-~{N}-[2-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-2-oxidanylidene-ethyl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide × 4
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.00 Å
R-free 0.218
|
|
6HUQ
Yeast 20S proteasome with human beta2c (S171G) in complex with 20
提交 2018-10-09
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GT5 ~{N}-[(2~{S})-1-[[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-methoxy-1-oxidanylidene-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-2-methyl-1,3-thiazole-5-carboxamide × 4
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.00 Å
R-free 0.207
|
|
6HUU
Yeast 20S proteasome with human beta2c (S171G) in complex with 29
提交 2018-10-09
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GTW ~{N}-[(2~{S})-1-[[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-cyclohexyl-1-oxidanylidene-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-2-methyl-1,3-thiazole-5-carboxamide × 4
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.221
|
|
6HUV
Yeast 20S proteasome with human beta2c (S171G) in complex with 39
提交 2018-10-09
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GT8 (2~{S})-~{N}-[(3~{S},4~{R})-1-cyclohexyl-5-methyl-4,5-bis(oxidanyl)hexan-3-yl]-3-(4-methoxyphenyl)-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 6
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.10 Å
R-free 0.213
|
|
6HV3
Yeast 20S proteasome with human beta2i (1-53)
提交 2018-10-10
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.209
|
|
6HV4
Yeast 20S proteasome with human beta2i (1-53) in complex with ONX 0914
提交 2018-10-10
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GQK (2~{S})-3-(4-methoxyphenyl)-~{N}-[(2~{S},3~{R})-4-methyl-3,4-bis(oxidanyl)-1-phenyl-pentan-2-yl]-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.00 Å
R-free 0.214
|
|
6HV5
Yeast 20S proteasome with human beta2i (1-53) in complex with 4
提交 2018-10-10
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GQH (2~{S})-~{N}-[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.00 Å
R-free 0.204
|
|
6HV7
Yeast 20S proteasome with human beta2i (1-53) in complex with 7
提交 2018-10-10
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GQQ ~{N}-[(2~{S})-1-[[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]pyrazine-2-carboxamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.40 Å
R-free 0.229
|
|
6HVA
Yeast 20S proteasome with human beta2i (1-53) in complex with 13
提交 2018-10-10
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GQT (2~{S})-~{N}-[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-propan-2-yl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.208
|
|
6HVR
Yeast 20S proteasome with human beta2i (1-53) in complex with 16
提交 2018-10-11
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GRW (2~{S})-~{N}-[(2~{S},3~{R})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-2-[[(2~{R})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.219
|
|
6HVS
Yeast 20S proteasome with human beta2i (1-53) in complex with 18
提交 2018-10-11
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GRT (2~{S})-~{N}-[2-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-2-oxidanylidene-ethyl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.10 Å
R-free 0.205
|
|
6HVT
Yeast 20S proteasome with human beta2i (1-53) in complex with 20
提交 2018-10-11
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GT5 ~{N}-[(2~{S})-1-[[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-methoxy-1-oxidanylidene-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-2-methyl-1,3-thiazole-5-carboxamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.206
|
|
6HVU
Yeast 20S proteasome with human beta2i (1-53) in complex with 29
提交 2018-10-11
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GTW ~{N}-[(2~{S})-1-[[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-cyclohexyl-1-oxidanylidene-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-2-methyl-1,3-thiazole-5-carboxamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.220
|
|
6HVV
Yeast 20S proteasome with human beta2i (1-53) in complex with 39
提交 2018-10-11
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GT8 (2~{S})-~{N}-[(3~{S},4~{R})-1-cyclohexyl-5-methyl-4,5-bis(oxidanyl)hexan-3-yl]-3-(4-methoxyphenyl)-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.219
|
|
6HVW
Yeast 20S proteasome with human beta2i (1-53) in complex with 43
提交 2018-10-11
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GVW (2~{S})-~{N}-[(2~{S},3~{R})-1-[(4~{a}~{S},8~{a}~{S})-1,2,3,4,4~{a},5,6,7,8,8~{a}-decahydronaphthalen-2-yl]-4-methyl-3,4-bis(oxidanyl)pentan-2-yl]-3-(4-methoxyphenyl)-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.00 Å
R-free 0.202
|
|
6HVX
Yeast 20S proteasome in complex with 4
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
GQH (2~{S})-~{N}-[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.206
|
|
6HVY
Yeast 20S proteasome in complex with 5 (7- and 6-membered ring)
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GVZ (2~{S})-~{N}-[(2~{S},3~{R})-1-[(1~{S},4~{a}~{S},8~{a}~{R})-1,2,3,4,4~{a},5,6,7,8,8~{a}-decahydronaphthalen-1-yl]-4-methyl-3,4-bis(oxidanyl)pentan-2-yl]-3-(4-methoxyphenyl)-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 2
GW2 (2~{S})-~{N}-[(2~{S},3~{S},4~{R})-1-[(1~{S},4~{a}~{S},8~{a}~{R})-1,2,3,4,4~{a},5,6,7,8,8~{a}-decahydronaphthalen-1-yl]-4-methyl-3,5-bis(oxidanyl)pentan-2-yl]-3-(4-methoxyphenyl)-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.218
|
|
6HW0
Yeast 20S proteasome in complex with 7
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GQQ ~{N}-[(2~{S})-1-[[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]pyrazine-2-carboxamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.206
|
|
6HW3
Yeast 20S proteasome in complex with 13
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GQT (2~{S})-~{N}-[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-propan-2-yl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.215
|
|
6HW4
Yeast 20S proteasome in complex with 16
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GRW (2~{S})-~{N}-[(2~{S},3~{R})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-2-[[(2~{R})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.210
|
|
6HW5
Yeast 20S proteasome in complex with 18
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GRT (2~{S})-~{N}-[2-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-2-oxidanylidene-ethyl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.211
|
|
6HW6
Yeast 20S proteasome in complex with 20
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
GT5 ~{N}-[(2~{S})-1-[[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-methoxy-1-oxidanylidene-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-2-methyl-1,3-thiazole-5-carboxamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.206
|
|
6HW7
Yeast 20S proteasome in complex with 29
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
GTW ~{N}-[(2~{S})-1-[[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-cyclohexyl-1-oxidanylidene-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-2-methyl-1,3-thiazole-5-carboxamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.225
|
|
6HW8
Yeast 20S proteasome in complex with 39
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
GT8 (2~{S})-~{N}-[(3~{S},4~{R})-1-cyclohexyl-5-methyl-4,5-bis(oxidanyl)hexan-3-yl]-3-(4-methoxyphenyl)-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.206
|
|
6HW9
Yeast 20S proteasome in complex with 41b
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
GWK (2~{S})-3-(4-methoxyphenyl)-~{N}-[(2~{S},3~{R})-4-methyl-1-(4-methylcyclohexyl)-3,4-bis(oxidanyl)pentan-2-yl]-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.205
|
|
6HWA
Yeast 20S proteasome in complex with 43
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 3
GVW (2~{S})-~{N}-[(2~{S},3~{R})-1-[(4~{a}~{S},8~{a}~{S})-1,2,3,4,4~{a},5,6,7,8,8~{a}-decahydronaphthalen-2-yl]-4-methyl-3,4-bis(oxidanyl)pentan-2-yl]-3-(4-methoxyphenyl)-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.216
|
|
6HWB
Yeast 20S proteasome in complex with 44b
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
GWT (2~{S})-~{N}-[(2~{S},3~{R})-1-(4-cyclohexylcyclohexyl)-4-methyl-3,4-bis(oxidanyl)pentan-2-yl]-3-(4-methoxyphenyl)-2-[[(2~{S})-2-(2-morpholin-4-ium-4-ylethanoylamino)propanoyl]amino]propanamide × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.221
|
|
6HWC
Yeast 20S proteasome beta2-G45A mutant
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.224
|
|
6HWD
Yeast 20S proteasome beta2-G45A mutant in complex with bortezomib
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
BO2 N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.211
|
|
6HWE
Yeast 20S proteasome beta2-G45A mutant in complex with carfilzomib
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GWZ (2~{S})-~{N}-[(2~{S})-1-[[(3~{R},4~{S})-2,6-dimethyl-2,3-bis(oxidanyl)heptan-4-yl]amino]-1-oxidanylidene-3-phenyl-propan-2-yl]-4-methyl-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)-4-phenyl-butanoyl]amino]pentanamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.30 Å
R-free 0.231
|
|
6HWF
Yeast 20S proteasome beta2-G45A mutant in complex with ONX 0914
提交 2018-10-11
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
GQK (2~{S})-3-(4-methoxyphenyl)-~{N}-[(2~{S},3~{R})-4-methyl-3,4-bis(oxidanyl)-1-phenyl-pentan-2-yl]-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide × 6
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.50 Å
R-free 0.216
|
|
6J2C
Yeast proteasome in translocation competent state (C3-a)
提交 2019-01-01
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
1–260(260 aa)
链 m
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 7.00 Å
|
|
6J2N
yeast proteasome in substrate-processing state (C3-b)
提交 2019-01-02
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
1–260(260 aa)
链 m
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 7.50 Å
|
|
6J2Q
Yeast proteasome in Ub-accepted state (C1-b)
提交 2019-01-02
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
1–260(260 aa)
链 m
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.80 Å
|
|
6J2X
Yeast proteasome in resting state (C1-a)
提交 2019-01-03
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
1–260(260 aa)
链 m
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.80 Å
|
|
6J30
yeast proteasome in Ub-engaged state (C2)
提交 2019-01-03
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
1–260(260 aa)
链 m
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 4.50 Å
|
|
6ZOU
Yeast 20S proteasome in complex with glidobactin-like natural product HB333
提交 2020-07-07
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
QOH 11-methyl-~{N}-[(2~{S},3~{R})-1-[[(5~{S},8~{S},10~{S})-5-methyl-10-oxidanyl-2,7-bis(oxidanylidene)-1,6-diazacyclododec-8-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]dodecanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.212
|
|
6ZP6
Yeast 20S proteasome in complex with glidobactin-like natural product HB334
提交 2020-07-08
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
QOB ~{N}-[(2~{S},3~{R})-1-[[(5~{S},8~{S},10~{S})-5-methyl-10-oxidanyl-2,7-bis(oxidanylidene)-1,6-diazacyclododec-8-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-5-phenyl-pentanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.202
|
|
6ZP8
Yeast 20S proteasome in complex with glidobactin-like natural product HB335
提交 2020-07-08
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
QOE (2~{S},3~{R})-~{N}-[(5~{S},8~{S},10~{S})-5-methyl-10-oxidanyl-2,7-bis(oxidanylidene)-1,6-diazacyclododec-8-yl]-3-oxidanyl-2-(3-phenylpropanoylamino)butanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.00 Å
R-free 0.200
|
|
7LS5
Cryo-EM structure of the Pre3-1 20S proteasome core particle
提交 2021-02-17
|
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;Fluorinated Fos-Choline was added to the sample immediately prior to deposition on a grid for plunge freezing.
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.74 Å
|
|
7LS6
Cryo-EM structure of Pre-15S proteasome core particle assembly intermediate purified from Pre3-1 proteasome mutant (G34D)
提交 2021-02-17
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 15
PDB 声明:pentadecameric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;Fluorinated Fos-Choline was added to the sample immediately prior to deposition on a grid for plunge freezing.
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.17 Å
|
|
7LSX
Cryo-EM structure of 13S proteasome core particle assembly intermediate purified from Pre3-1 proteasome mutant (G34D)
提交 2021-02-18
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 13
PDB 声明:tridecameric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;Fluorinated Fos-Choline was added to the sample immediately prior to deposition on a grid for plunge freezing.
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.61 Å
|
|
7QO3
Structure of the 26S proteasome-Ubp6 complex in the si state (Core Particle and Lid)
提交 2021-12-23
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 41
PDB 声明:41-meric
|
链 E
1–260(260 aa)
链 e
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 6.10 Å
|
|
7QO5
26S proteasome Rpt1-RK -Ubp6-UbVS complex in the si state
提交 2021-12-23
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 49
PDB 声明:49-meric
|
链 E
1–260(260 aa)
链 e
1–260(260 aa)
|
未记录
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 5
MG MAGNESIUM ION × 6
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 6.00 Å
|
|
7TEJ
Cryo-EM structure of the 20S Alpha 3 Deletion proteasome core particle
提交 2022-01-05
|
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;Fluorinated Fos-Choline was added to the sample immediately prior to deposition on a grid for plunge freezing.
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.74 Å
|
|
7TEO
Cryo-EM structure of the 20S Alpha 3 Deletion proteasome core particle in complex with FUB1
提交 2022-01-05
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 30
PDB 声明:30-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;Fluorinated Fos-Choline was added to the sample immediately prior to deposition on a grid for plunge freezing.
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.97 Å
|
|
8BW1
Yeast 20S proteasome in complex with an engineered fellutamide derivative (C14QAL)
提交 2022-12-06
|
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 3
MYR MYRISTIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;100 mM MES, 20 mM MgAc2, 11% MPD
|
分辨率 3.25 Å
R-free 0.212
|
|
8OHZ
Yeast 20S proteasome in complex with a photoswitchable cepafungin derivative (transCep1)
提交 2023-03-21
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
VOT (2~{S},3~{R})-2-[2-[4-[2-(4-ethylphenyl)hydrazinyl]phenyl]ethanoylamino]-~{N}-[(5~{S},8~{S},10~{S})-5-methyl-10-oxidanyl-2,7-bis(oxidanylidene)-1,6-diazacyclododec-8-yl]-3-oxidanyl-butanamide × 4
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.65 Å
R-free 0.222
|
|
8OI1
Yeast 20S proteasome in complex with a photoswitchable cepafungin derivative (transCep4)
提交 2023-03-21
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
VOX ~{N}-[(2~{S},3~{R})-1-[[(5~{S},8~{S},10~{S})-5-methyl-10-oxidanyl-2,7-bis(oxidanylidene)-1,6-diazacyclododec-8-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-7-[4-[2-(4-methylphenyl)hydrazinyl]phenyl]heptanamide × 4
CL CHLORIDE ION × 2
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.95 Å
R-free 0.224
|
|
8OLR
Structure of yeast 20S proteasome in complex with the natural product beta-lactone inhibitor Cystargolide A
提交 2023-03-30
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 2
VSZ Cystargolide A (bound) × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.208
|
|
8RHJ
Yeast 20S proteasome in complex with a macrocyclic oxindole epoxyketone (compound 5)
提交 2023-12-15
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.05 Å
R-free 0.212
|
|
8RHK
Yeast 20S proteasome in complex with a linear oxindole epoxyketone (compound 6)
提交 2023-12-15
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.218
|
|
8RHL
Yeast 20S proteasome in complex with a linear biarylether epoxyketone (compound 15a)
提交 2023-12-15
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.20 Å
R-free 0.228
|
|
8RVL
Proteasomal late precursor complex from pre1-1
提交 2024-02-01
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;150 mM NaCl
50 mM Tris-HCl
cryo-EM玻璃化条件
冷冻剂 ETHANE;manual plunge freezing device purchased from 'Neptune Fluid Flow Systems'
|
分辨率 2.14 Å
|
|
8RVO
Proteasomal late precursor complex from pre1-1, state 1
提交 2024-02-01
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;150 mM NaCl
50 mM Tris-HCl
cryo-EM玻璃化条件
冷冻剂 ETHANE;manual plunge freezing device purchased from 'Neptune Fluid Flow Systems'
|
分辨率 2.69 Å
|
|
8RVP
Proteasomal late precursor complex from pre1-1, state 2
提交 2024-02-01
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;150 mM NaCl
50 mM Tris-HCl
cryo-EM玻璃化条件
冷冻剂 ETHANE;manual plunge freezing device purchased from 'Neptune Fluid Flow Systems'
|
分辨率 2.28 Å
|
|
8RVQ
20S proteasome from pre1-1
提交 2024-02-01
|
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;150 mM NaCl
50 mM Tris-HCl
cryo-EM玻璃化条件
冷冻剂 ETHANE;manual plunge freezing device purchased from 'Neptune Fluid Flow Systems'
|
分辨率 2.02 Å
|
|
8T08
Preholo-Proteasome from Pre1-1 Pre4-1 Double Mutant
提交 2023-05-31
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 E
1–260(260 aa)
链 V
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;Fluorinated Fos-Choline was added to the sample immediately prior to deposition on a grid for plunge freezing.
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.00 Å
|
|
8T0M
Proteasome 20S core particle from Pre1-1 Pre4-1 Double mutant
提交 2023-06-01
|
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;Fluorinated Fos-Choline was added to the sample immediately prior to deposition on a grid for plunge freezing.
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.40 Å
|
|
8U6Y
Preholo-Proteasome from Beta 3 D205 deletion
提交 2023-09-14
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 E
1–260(260 aa)
链 V
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;Fluorinated Fos-Choline was added immediately prior to deposition on a grid for plunge freezing.
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.80 Å
|
|
8U7U
Proteasome 20S Core Particle from Beta 3 D205 deletion
提交 2023-09-15
|
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;Fluorinated Fos-Choline was added immediately prior to deposition on a grid for plunge freezing.
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.16 Å
|
|
9AW3
Yeast 20S proteasome soaked with MA9 crude extract
提交 2024-03-05
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;291 K;MES 100 mM pH 5.5-6.9, MPD 8-18% and magnesium acetate 20 mM
|
分辨率 3.42 Å
R-free 0.259
|
|
9AW5
Yeast 20S proteasome soaked with MA9 fraction E/F
提交 2024-03-05
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
SO4 SULFATE ION × 61
MG MAGNESIUM ION × 8
A1A9B (10S,11R,12S,15S,18S)-15-(2-amino-2-oxoethyl)-10,11,23-trihydroxy-18-{[(3R)-3-methyl-2-oxopentanoyl]amino}-9,14,17-trioxo-N-[(1Z)-prop-1-en-1-yl]-8,13,16-triazatetracyclo[18.3.1.0(2,7).0(6,10)]tetracosa-1(24),2,4,6,20,22-hexaene-12-carboxamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;291 K;MES 100 mM pH 5.5-6.9, MPD 8-18% and magnesium acetate 20 mM
|
分辨率 3.44 Å
R-free 0.252
|
|
9AW6
Yeast 20S proteasome soaked with MA9 fraction EF2
提交 2024-03-05
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
SO4 SULFATE ION × 58
A1A9B (10S,11R,12S,15S,18S)-15-(2-amino-2-oxoethyl)-10,11,23-trihydroxy-18-{[(3R)-3-methyl-2-oxopentanoyl]amino}-9,14,17-trioxo-N-[(1Z)-prop-1-en-1-yl]-8,13,16-triazatetracyclo[18.3.1.0(2,7).0(6,10)]tetracosa-1(24),2,4,6,20,22-hexaene-12-carboxamide × 6
MG MAGNESIUM ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;291 K;MES 100 mM pH 5.5-6.9, MPD 8-18% and magnesium acetate 20 mM
|
分辨率 3.44 Å
R-free 0.235
|
|
9C98
Yeast 20S proteasome soaked with isolated TMC-86A
提交 2024-06-13
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
SO4 SULFATE ION × 69
MG MAGNESIUM ION × 12
A1AU6 N-[(2S)-3-hydroxy-1-{[(4S)-1-hydroxy-2-(hydroxymethyl)-6-methyl-3-oxoheptan-4-yl]amino}-1-oxopropan-2-yl]butanamide × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.9;291 K;MES 100 mM pH 6.9, MPD 25% and magnesium acetate 20 mM
|
分辨率 3.04 Å
R-free 0.221
|
|
9CGC
Yeast 26S proteasome non-substrate-engaged (S1 state)
提交 2024-06-28
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 39
PDB 声明:39-meric
|
链 E
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 5
ATP ADENOSINE-5'-TRIPHOSPHATE × 5
ZN ZINC ION × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4;30 mM HEPES pH7.4, 25 mM NaCl, 25 mM KCl, 3% (v/v) glycerol, 5 mM MgCl2
2 mM ATP and 0.5 mM TCEP, 0.02% NP-40.
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.61 Å
|
|
9D0T
Proteasome core particle assembly intermediate Blm10:13S purified from Saccharomyces cerevisiae
提交 2024-08-07
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 12
PDB 声明:dodecameric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.84 Å
|
|
9D4C
Proteasome core particle assembly intermediate Blm10:alpha-ring purified from Saccharomyces cerevisiae.
提交 2024-08-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 9
PDB 声明:nonameric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.75 Å
|
|
9D4U
Core particle assembly intermediate Capless 13S purified from Saccharomyces cerevisiae
提交 2024-08-13
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 11
PDB 声明:11-meric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.55 Å
|
|
9EY9
Yeast 20S proteasome in complex with a sybactin derivative (PheSyr)
提交 2024-04-09
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
A1H71 sybactin derivative × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.10 Å
R-free 0.241
|
|
9FRW
Yeast 20S proteasome with human beta1i (1-51)
提交 2024-06-19
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
CL CHLORIDE ION × 7
MG MAGNESIUM ION × 9
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.85 Å
R-free 0.227
|
|
9FST
Yeast 20S proteasome with human beta1i (1-51) in complex with epoxyketone inhibitor LU-001i
提交 2024-06-21
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
CL CHLORIDE ION × 4
MG MAGNESIUM ION × 8
A1IF8 azanylidene-[2-[[(2S)-1-[(2S)-2-[[(2S)-1-[[(1S)-2-cyclohexyl-1-[(2R,3S,6R,7S)-3-methanoyl-2,6-dimethyl-6,7-bis(oxidanyl)-1,4-oxazepan-7-yl]ethyl]amino]-1-oxidanylidene-hexan-2-yl]carbamoyl]-4,4-bis(fluoranyl)pyrrolidin-1-yl]-1-oxidanylidene-propan-2-yl]amino]-2-oxidanylidene-ethyl]imino-azanium × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.75 Å
R-free 0.245
|
|
9FSU
Yeast 20S proteasome with human beta1i (1-51) in complex with epoxyketone inhibitor 16
提交 2024-06-21
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 3
SO4 SULFATE ION × 4
A1IFL (2S)-N-[(2S)-1-[[(1S)-2-cyclohexyl-1-[(2R,3S,6R,7S)-3-methanoyl-2,6-dimethyl-6,7-bis(oxidanyl)-1,4-oxazepan-7-yl]ethyl]amino]-3-(4-methoxyphenyl)-1-oxidanylidene-propan-2-yl]-2-(2-morpholin-4-ylethanoylamino)-4-oxidanyl-butanamide × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.75 Å
R-free 0.245
|
|
9FSV
Yeast 20S proteasome with human beta2i (1-53) in complex with epoxyketone inhibitor 16
提交 2024-06-22
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
信息不足
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 3
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
A1IFL (2S)-N-[(2S)-1-[[(1S)-2-cyclohexyl-1-[(2R,3S,6R,7S)-3-methanoyl-2,6-dimethyl-6,7-bis(oxidanyl)-1,4-oxazepan-7-yl]ethyl]amino]-3-(4-methoxyphenyl)-1-oxidanylidene-propan-2-yl]-2-(2-morpholin-4-ylethanoylamino)-4-oxidanyl-butanamide × 4
SO4 SULFATE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.75 Å
R-free 0.247
|
|
9FT0
Yeast 20S proteasome in complex with epoxyketone inhibitor 16
提交 2024-06-23
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 9
CL CHLORIDE ION × 5
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 3
A1IFL (2S)-N-[(2S)-1-[[(1S)-2-cyclohexyl-1-[(2R,3S,6R,7S)-3-methanoyl-2,6-dimethyl-6,7-bis(oxidanyl)-1,4-oxazepan-7-yl]ethyl]amino]-3-(4-methoxyphenyl)-1-oxidanylidene-propan-2-yl]-2-(2-morpholin-4-ylethanoylamino)-4-oxidanyl-butanamide × 4
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.75 Å
R-free 0.232
|
|
9FT1
Yeast 20S proteasome in complex with epoxyketone inhibitor 9
提交 2024-06-23
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 5
A1IFK tert-butyl 4-[2-[[(2S)-1-[[(2S)-1-[[(1S)-2-cyclohexyl-1-[(2R,3S,6R,7S)-3-methanoyl-2,6-dimethyl-6,7-bis(oxidanyl)-1,4-oxazepan-7-yl]ethyl]amino]-3-(4-methoxyphenyl)-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-3-phenylmethoxy-propan-2-yl]amino]-2-oxidanylidene-ethyl]piperazine-1-carboxylate × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.222
|
|
9GBK
Blm10-20S proteasome complex from pre1-1
提交 2024-07-31
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 29
PDB 声明:29-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;150 mM NaCl
50 mM Tris-HCl
cryo-EM玻璃化条件
冷冻剂 ETHANE;manual plunge freezing device purchased from 'Neptune Fluid Flow Systems'
|
分辨率 2.39 Å
|
|
9IWR
26S proteasome trimer
提交 2024-07-25
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 47
PDB 声明:47-meric
|
链 E
1–260(260 aa)
链 e
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 6.8;YPD buffer
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 9.10 Å
|
|
9QAF
Yeast 20S proteasome mutant: beta5_T3M
提交 2025-02-28
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.213
|
|
9QAI
Yeast 20S proteasome mutant: beta5_T3M in complex with MG132
提交 2025-02-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 11
CL CHLORIDE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.205
|
|
9QB1
Yeast 20S proteasome mutant: beta5_T3M in complex with Bortezomib
提交 2025-02-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.215
|
|
9QB4
Yeast 20S proteasome mutant: beta5_T3M in complex with Carfilzomib
提交 2025-02-28
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.207
|
|
9QBE
Yeast 20S proteasome mutant: beta5_T3M in complex with ONX0914
提交 2025-03-02
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 10
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.211
|
|
9QBI
Yeast 20S proteasome mutant: beta5_G128V (b5-propeptide in trans)
提交 2025-03-03
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
SO4 SULFATE ION × 2
MG MAGNESIUM ION × 3
CL CHLORIDE ION × 2
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.215
|
|
9QBO
Yeast 20S proteasome mutant: beta5_G128V (b5-propeptide in trans) in complex with MG132
提交 2025-03-03
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
SO4 SULFATE ION × 4
MG MAGNESIUM ION × 2
CL CHLORIDE ION × 4
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.212
|
|
9QBW
Yeast 20S proteasome mutant: beta5_G128V (b5-propeptide in trans) in complex with Carfilzomib
提交 2025-03-03
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 3
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 5
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 2
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.207
|
|
9QBY
Yeast 20S proteasome mutant: beta5_G128V (b5-propeptide in trans) in complex with ONX0914
提交 2025-03-04
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 3
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 6
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.211
|
|
9QC9
Yeast 20S proteasome double mutant: beta5_F(-46)S / beta5_G128V
提交 2025-03-04
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 6
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 8
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.60 Å
R-free 0.224
|
|
9QCF
Yeast 20S proteasome mutant: beta1_G128V
提交 2025-03-04
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.90 Å
R-free 0.214
|
|
9QCK
Yeast 20S proteasome mutant: beta1_G128V (b1-propeptide deleted)
提交 2025-03-04
|
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 28
PDB 声明:28-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 5
CL CHLORIDE ION × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.213
|
|
9QD2
Yeast 20S proteasome mutant: beta1_G128V (b1-propeptide deleted) in complex with MG132
提交 2025-03-05
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 4
CL CHLORIDE ION × 5
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.214
|
|
9QDF
Yeast 20S proteasome mutant: beta1_G128V (b1-propeptide deleted) in complex with Bortezomib
提交 2025-03-06
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 4
CL CHLORIDE ION × 5
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.70 Å
R-free 0.217
|
|
9QDS
Yeast 20S proteasome mutant: beta1_G128V (b1-propeptide deleted) in complex with Carfilzomib
提交 2025-03-06
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 34
PDB 声明:34-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 4
CL CHLORIDE ION × 5
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 2.80 Å
R-free 0.211
|
|
9RL3
13S proteasome precursor complex
提交 2025-06-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 13
PDB 声明:13-meric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;150 mM NaCl
50 mM Tris-HCl
cryo-EM玻璃化条件
冷冻剂 ETHANE;manual plunge freezing device purchased from "Neptune FLuid Flow Systems"
|
分辨率 3.31 Å
|
|
9RLA
13S+Beta1 proteasome precursor complex
提交 2025-06-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 14
PDB 声明:14-meric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;150 mM NaCl
50 mM Tris-HCl
cryo-EM玻璃化条件
冷冻剂 ETHANE;manual plunge freezing device purchased from "Neptune FLuid Flow Systems"
|
分辨率 3.16 Å
|
|
9RLT
dimerised 13S-13S+Beta5 proteasome precursor complexes
提交 2025-06-17
|
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 27
PDB 声明:27-meric
|
链 E
1–260(260 aa)
链 S
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;150 mM NaCl
50 mM Tris-HCl
cryo-EM玻璃化条件
冷冻剂 ETHANE;manual plunge freezing device purchased from "Neptune FLuid Flow Systems"
|
分辨率 3.09 Å
|
|
9RLZ
15S proteasome precursor complex
提交 2025-06-17
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 16
PDB 声明:16-meric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;150 mM NaCl
50 mM Tris-HCl
cryo-EM玻璃化条件
冷冻剂 ETHANE;manual plunge freezing device purchased from "Neptune FLuid Flow Systems"
|
分辨率 3.12 Å
|
|
9RM0
13S+Beta5+Beta6 proteasome precursor complex
提交 2025-06-17
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 15
PDB 声明:15-meric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;150 mM NaCl
50 mM Tris-HCl
cryo-EM玻璃化条件
冷冻剂 ETHANE;manual plunge freezing device purchased from "Neptune FLuid Flow Systems"
|
分辨率 3.29 Å
|
|
9RM1
13S+Beta1+Beta5 proteasome precursor complex
提交 2025-06-17
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 15
PDB 声明:15-meric
|
链 E
1–260(260 aa)
|
未记录
|
未记录非水小分子
|
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.5;150 mM NaCl
50 mM Tris-HCl
cryo-EM玻璃化条件
冷冻剂 ETHANE;manual plunge freezing device purchased from "Neptune FLuid Flow Systems"
|
分辨率 4.11 Å
|
|
9S78
Yeast 20S Proteasome in Complex with Tellurophene-Tagged Carfilzomib
提交 2025-08-04
|
聚集状态不同
配体/离子不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 32
PDB 声明:32-meric
|
链 D
1–260(260 aa)
链 R
1–260(260 aa)
|
未记录
|
MG MAGNESIUM ION × 7
CL CHLORIDE ION × 4
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
|
分辨率 3.15 Å
R-free 0.223
|