|
12DK
structure of human KCNQ1-CaM-PIP2 intermediate state
Deposited 2026-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
PT5 [(2R)-1-octadecanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phospho ryl]oxy-propan-2-yl] (8Z)-icosa-5,8,11,14-tetraenoate × 4
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.47 Å
|
|
22RJ
Human KCNQ3-CaM in apo state
Deposited 2026-01-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
mmCIF provides none of the parsed conditions
|
Resolution 2.82 Å
|
|
2KUG
Halothane binds to druggable sites in calcium-calmodulin: Solution Structure of halothane-CaM N-terminal domain
Deposited 2010-02-17
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 2
HLT 2-BROMO-2-CHLORO-1,1,1-TRIFLUOROETHANE × 1
|
SOLUTION NMR
NMR measurement conditions
pH 7.2;298 K;Ionic strength (raw mmCIF value) 0.1;Pressure ambient
NMR sample composition
2 mM [U-99% 13C; U-99% 15N] CALMODULIN, 20 mM CALCIUM ION, 20 mM N-{[2-({[1-(4-CARBOXYBUTANOYL)AMINO]-2-PHENYLETHYL}-HYDROXYPHOSPHINYL)OXY]ACETYL}-2-PHENYLETHYLAMINE, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
2 mM [U-99% 15N] CALMODULIN, 20 mM CALCIUM ION, 20 mM N-{[2-({[1-(4-CARBOXYBUTANOYL)AMINO]-2-PHENYLETHYL}-HYDROXYPHOSPHINYL)OXY]ACETYL}-2-PHENYLETHYLAMINE, 95% H2O/5% D2O | 95% H2O/5% D2O
|
Resolution not provided
|
|
3EVV
Crystal Structure of Calcium bound dimeric GCAMP2 (#2)
Deposited 2008-10-13
|
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
5–149(145 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 8
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 2.60 Å
R-free 0.270
|
|
3O77
The structure of Ca2+ Sensor (Case-16)
Deposited 2010-07-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
3–149(147 aa)
|
Mutation:POINT MUTATIONS
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 2
SO4 SULFATE ION × 2
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.4;293 K;Reservoir: 50mM Imidazol, 1.9M Na2malonate pH 6.4; Protein stock solution: 50mM Tris HCl (pH 7.4), 150mM NaCl, 10mM dithiothreitol, protein 4.1mg/ml; Drop ratio reservoir/protein = 1/3, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 2.35 Å
R-free 0.274
|
|
3O78
The structure of Ca2+ Sensor (Case-12)
Deposited 2010-07-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
3–149(147 aa)
|
Mutation:POINT MUTATIONS
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5.5;293 K;Reservoir: 100mM Tris HCL (pH 5.5), 100mM (NH4)2SO4, 21% PEG 3350; Protein stock: 7.6 mg/ml Protein, 50mM Tris HCl (pH 7.4), 150mM NaCl; Seed stock solution: 20mM CaCl2, 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 2.60 Å
R-free 0.316
|
|
3O78
The structure of Ca2+ Sensor (Case-12)
Deposited 2010-07-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Insufficient information
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
3–149(147 aa)
|
Mutation:POINT MUTATIONS
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5.5;293 K;Reservoir: 100mM Tris HCL (pH 5.5), 100mM (NH4)2SO4, 21% PEG 3350; Protein stock: 7.6 mg/ml Protein, 50mM Tris HCl (pH 7.4), 150mM NaCl; Seed stock solution: 20mM CaCl2, 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 2.60 Å
R-free 0.316
|
|
3O78
The structure of Ca2+ Sensor (Case-12)
Deposited 2010-07-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Insufficient information
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
3–149(147 aa)
Chain B
3–149(147 aa)
|
Mutation:POINT MUTATIONS
Non-standard monomer:Yes (specific site not provided by mmCIF)
Mutation:POINT MUTATIONS
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 8
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5.5;293 K;Reservoir: 100mM Tris HCL (pH 5.5), 100mM (NH4)2SO4, 21% PEG 3350; Protein stock: 7.6 mg/ml Protein, 50mM Tris HCl (pH 7.4), 150mM NaCl; Seed stock solution: 20mM CaCl2, 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 2.60 Å
R-free 0.316
|
|
5OEO
Solution structure of the complex of TRPV5(655-725) with a Calmodulin E32Q/E68Q double mutant
Deposited 2017-07-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Mutation:E32Q, E68Q
|
CA CALCIUM ION × 2
|
SOLUTION NMR
NMR measurement conditions
pH 7.4;308 K;Ionic strength (raw mmCIF value) 84;Pressure 1
NMR sample composition
220 uM 13C/15N Calmodulin, 220 uM hTRPV5(655-725), 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
380 uM [U-99% 15N] Calmodulin, 380 uM [U-99% 13C; U-99% 15N] hTRPV5(655-725), 95% H2O/5% D2O | 95% H2O/5% D2O
|
Resolution not provided
|
|
5V02
A positive allosteric modulator binding pocket in SK2 ion channels is shared by Riluzole and CyPPA
Deposited 2017-02-28
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain R
1–149(149 aa)
|
Not recorded
|
SO4 SULFATE ION × 2
657 6-(trifluoromethoxy)-1,3-benzothiazol-2-amine × 1
GOL GLYCEROL × 1
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;295 K;ammonia sulfate
|
Resolution 1.78 Å
R-free 0.215
|
|
5V7X
Crystal Structure of Myosin 1b residues 1-728 with bound sulfate and Calmodulin
Deposited 2017-03-20
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
1–149(149 aa)
|
Not recorded
|
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;277 K;10% PEG 3350, 100 mM LiOOCCH3, 100 mM HEPES, pH 7.0, 20 mM Mg2SO4
|
Resolution 3.14 Å
R-free 0.202
|
|
5WBX
Structural insights into the potency of SK/IK channel positive modulators
Deposited 2017-06-29
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain R
5–148(144 aa)
|
Not recorded
|
SO4 SULFATE ION × 4
GOL GLYCEROL × 2
CA CALCIUM ION × 2
AJY (3Z)-6-bromo-3-(hydroxyimino)-5-methyl-1,3-dihydro-2H-indol-2-one × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5.8;293.15 K;0.1 M Sodium itrate tribasic dihydrate
0.5 M Ammonium sulfate
1.5 M Lithium sulfate monohydrate
|
Resolution 1.90 Å
R-free 0.243
|
|
5WBX
Structural insights into the potency of SK/IK channel positive modulators
Deposited 2017-06-29
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain R
5–148(144 aa)
|
Not recorded
|
SO4 SULFATE ION × 8
GOL GLYCEROL × 4
CA CALCIUM ION × 4
AJY (3Z)-6-bromo-3-(hydroxyimino)-5-methyl-1,3-dihydro-2H-indol-2-one × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5.8;293.15 K;0.1 M Sodium itrate tribasic dihydrate
0.5 M Ammonium sulfate
1.5 M Lithium sulfate monohydrate
|
Resolution 1.90 Å
R-free 0.243
|
|
5WC5
Structural insights into the potency of SK/IK channel positive modulators
Deposited 2017-06-29
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain R
5–148(144 aa)
|
Not recorded
|
SO4 SULFATE ION × 6
GOL GLYCEROL × 1
CA CALCIUM ION × 2
AJV 7-fluoro-3-(hydroxyamino)-2H-indol-2-one × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5.8;293.15 K;0.1 M Sodium citrate tribasic dihydrate
0.5 M Ammonium sulfate
1.5 M Litium sulfate monohydrate
|
Resolution 2.30 Å
R-free 0.250
|
|
5WC5
Structural insights into the potency of SK/IK channel positive modulators
Deposited 2017-06-29
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain R
5–148(144 aa)
|
Not recorded
|
SO4 SULFATE ION × 12
GOL GLYCEROL × 2
CA CALCIUM ION × 4
AJV 7-fluoro-3-(hydroxyamino)-2H-indol-2-one × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5.8;293.15 K;0.1 M Sodium citrate tribasic dihydrate
0.5 M Ammonium sulfate
1.5 M Litium sulfate monohydrate
|
Resolution 2.30 Å
R-free 0.250
|
|
6B8L
Crystal Structure of the Apo/CaM:Kv7.4 (KCNQ4) AB Domain Complex
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5
|
Resolution 2.30 Å
R-free 0.246
|
|
6B8L
Crystal Structure of the Apo/CaM:Kv7.4 (KCNQ4) AB Domain Complex
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
1–149(149 aa)
|
Not recorded
|
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5
|
Resolution 2.30 Å
R-free 0.246
|
|
6B8L
Crystal Structure of the Apo/CaM:Kv7.4 (KCNQ4) AB Domain Complex
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain F
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5
|
Resolution 2.30 Å
R-free 0.246
|
|
6B8L
Crystal Structure of the Apo/CaM:Kv7.4 (KCNQ4) AB Domain Complex
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain H
1–149(149 aa)
|
Not recorded
|
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5
|
Resolution 2.30 Å
R-free 0.246
|
|
6B8M
Crystal Structure of the Ca2+/CaM:Kv7.4 (KCNQ4) AB Domain Complex, 1 mM CaCl2 soak
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5, 1mM CaCl2
|
Resolution 2.30 Å
R-free 0.262
|
|
6B8M
Crystal Structure of the Ca2+/CaM:Kv7.4 (KCNQ4) AB Domain Complex, 1 mM CaCl2 soak
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5, 1mM CaCl2
|
Resolution 2.30 Å
R-free 0.262
|
|
6B8M
Crystal Structure of the Ca2+/CaM:Kv7.4 (KCNQ4) AB Domain Complex, 1 mM CaCl2 soak
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain F
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 2
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5, 1mM CaCl2
|
Resolution 2.30 Å
R-free 0.262
|
|
6B8M
Crystal Structure of the Ca2+/CaM:Kv7.4 (KCNQ4) AB Domain Complex, 1 mM CaCl2 soak
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain H
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 2
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5, 1mM CaCl2
|
Resolution 2.30 Å
R-free 0.262
|
|
6B8N
Crystal Structure of the Ca2+/CaM:Kv7.4 (KCNQ4) AB Domain Complex, 10 uM CaCl2 soak
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5, 0.01mM CaCl2
|
Resolution 2.20 Å
R-free 0.264
|
|
6B8N
Crystal Structure of the Ca2+/CaM:Kv7.4 (KCNQ4) AB Domain Complex, 10 uM CaCl2 soak
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5, 0.01mM CaCl2
|
Resolution 2.20 Å
R-free 0.264
|
|
6B8N
Crystal Structure of the Ca2+/CaM:Kv7.4 (KCNQ4) AB Domain Complex, 10 uM CaCl2 soak
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain F
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5, 0.01mM CaCl2
|
Resolution 2.20 Å
R-free 0.264
|
|
6B8N
Crystal Structure of the Ca2+/CaM:Kv7.4 (KCNQ4) AB Domain Complex, 10 uM CaCl2 soak
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain H
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5, 0.01mM CaCl2
|
Resolution 2.20 Å
R-free 0.264
|
|
6B8P
Crystal Structure of the Mg2+/CaM:Kv7.4 (KCNQ4) AB domain complex
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
1–149(149 aa)
|
Not recorded
|
MG MAGNESIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5, 1mM MgCl2
|
Resolution 2.20 Å
R-free 0.240
|
|
6B8P
Crystal Structure of the Mg2+/CaM:Kv7.4 (KCNQ4) AB domain complex
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
1–149(149 aa)
|
Not recorded
|
MG MAGNESIUM ION × 1
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5, 1mM MgCl2
|
Resolution 2.20 Å
R-free 0.240
|
|
6B8P
Crystal Structure of the Mg2+/CaM:Kv7.4 (KCNQ4) AB domain complex
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain F
1–149(149 aa)
|
Not recorded
|
MG MAGNESIUM ION × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5, 1mM MgCl2
|
Resolution 2.20 Å
R-free 0.240
|
|
6B8P
Crystal Structure of the Mg2+/CaM:Kv7.4 (KCNQ4) AB domain complex
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain H
1–149(149 aa)
|
Not recorded
|
MG MAGNESIUM ION × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;2M ammonium sulfate, 0.1M BisTris pH 6.5, 1mM MgCl2
|
Resolution 2.20 Å
R-free 0.240
|
|
6B8Q
Crystal Structure of the Mg2+/CaM:Kv7.5 (KCNQ5) AB domain complex
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
1–149(149 aa)
|
Not recorded
|
MG MAGNESIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;0.2M magnesium formate, 20% PEG 3350
|
Resolution 2.60 Å
R-free 0.270
|
|
6B8Q
Crystal Structure of the Mg2+/CaM:Kv7.5 (KCNQ5) AB domain complex
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
1–149(149 aa)
|
Not recorded
|
MG MAGNESIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;0.2M magnesium formate, 20% PEG 3350
|
Resolution 2.60 Å
R-free 0.270
|
|
6B8Q
Crystal Structure of the Mg2+/CaM:Kv7.5 (KCNQ5) AB domain complex
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain F
1–149(149 aa)
|
Not recorded
|
MG MAGNESIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;0.2M magnesium formate, 20% PEG 3350
|
Resolution 2.60 Å
R-free 0.270
|
|
6B8Q
Crystal Structure of the Mg2+/CaM:Kv7.5 (KCNQ5) AB domain complex
Deposited 2017-10-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain H
1–149(149 aa)
|
Not recorded
|
MG MAGNESIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;0.2M magnesium formate, 20% PEG 3350
|
Resolution 2.60 Å
R-free 0.270
|
|
6BUT
Solution structure of full-length apo mammalian calmodulin bound to the IQ motif of the human voltage-gated sodium channel NaV1.2
Deposited 2017-12-11
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 6.5;298 K;Ionic strength (raw mmCIF value) 100;Pressure 1
NMR measurement conditions
pH 6.5;298 K;Ionic strength (raw mmCIF value) 100;Pressure 1
NMR sample composition
0.950 mM U-99% C13, U-99% N15 Calmodulin, 0.950 mM U-99% C13, U-99% N15 voltage-gated sodium channel NaV1.2 IQ motif, 0.1 mM U-98% 2H EDTA, 100 mM KCl, 10 mM [U-99% 2H] imidazole, 0.01 % w/v sodium azide, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
0.95 mM U-99% C13, U-99% N15 Calmodulin, 0.95 mM U-99% C13, U-99% N15 voltage-gated sodium channel NaV1.2 IQ motif, 0.1 mM U-98% 2H EDTA, 100 mM potassium chloride, 10 mM [U-99% 2H] imidazole, 0.01 % w/v sodium azide, 100% D2O | 100% D2O
|
Resolution not provided
|
|
6CNM
Cryo-EM structure of the human SK4/calmodulin channel complex
Deposited 2018-03-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
K POTASSIUM ION × 5
POV (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate × 4
LMT DODECYL-BETA-D-MALTOSIDE × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.40 Å
|
|
6CNN
Cryo-EM structure of the human SK4/calmodulin channel complex in the Ca2+ bound state I
Deposited 2018-03-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
K POTASSIUM ION × 4
POV (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate × 4
LMT DODECYL-BETA-D-MALTOSIDE × 8
CA CALCIUM ION × 12
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.50 Å
|
|
6CNO
Cryo-EM structure of the human SK4/calmodulin channel complex in the Ca2+ bound state II
Deposited 2018-03-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 12
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.70 Å
|
|
6DAD
1.65 Angstrom crystal structure of the N97I Ca/CaM:CaV1.2 IQ domain complex
Deposited 2018-05-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Mutation:N97I
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;2.1 M sodium malonate, 0.1 M HEPES, pH 7.5
|
Resolution 1.65 Å
R-free 0.208
|
|
6DAD
1.65 Angstrom crystal structure of the N97I Ca/CaM:CaV1.2 IQ domain complex
Deposited 2018-05-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
2–149(148 aa)
|
Mutation:N97I
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;2.1 M sodium malonate, 0.1 M HEPES, pH 7.5
|
Resolution 1.65 Å
R-free 0.208
|
|
6DAE
2.0 Angstrom crystal structure of the D95V Ca/CaM:CaV1.2 IQ domain complex
Deposited 2018-05-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Mutation:D95V
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 10.3;277 K;1 M lithium chloride, 30% PEG6000, 0.1M Bicine, pH 10.3
|
Resolution 2.00 Å
R-free 0.226
|
|
6DAE
2.0 Angstrom crystal structure of the D95V Ca/CaM:CaV1.2 IQ domain complex
Deposited 2018-05-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
2–149(148 aa)
|
Mutation:D95V
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 10.3;277 K;1 M lithium chloride, 30% PEG6000, 0.1M Bicine, pH 10.3
|
Resolution 2.00 Å
R-free 0.226
|
|
6DAF
2.4 Angstrom crystal structure of the F141L Ca/CaM:CaV1.2 IQ domain complex
Deposited 2018-05-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Mutation:F141L
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;0.5 M potassium nitrate, 20% PEG3350
|
Resolution 2.40 Å
R-free 0.243
|
|
6DAF
2.4 Angstrom crystal structure of the F141L Ca/CaM:CaV1.2 IQ domain complex
Deposited 2018-05-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
2–149(148 aa)
|
Mutation:F141L
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;0.5 M potassium nitrate, 20% PEG3350
|
Resolution 2.40 Å
R-free 0.243
|
|
6DAH
2.5 Angstrom crystal structure of the N97S CaM mutant
Deposited 2018-05-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
1–149(149 aa)
|
Mutation:N97S
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;20% PEG3350, 0.1 M Bis-Tris, pH 6.5
|
Resolution 2.50 Å
R-free 0.279
|
|
6DAH
2.5 Angstrom crystal structure of the N97S CaM mutant
Deposited 2018-05-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
1–149(149 aa)
|
Mutation:N97S
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;20% PEG3350, 0.1 M Bis-Tris, pH 6.5
|
Resolution 2.50 Å
R-free 0.279
|
|
6DAH
2.5 Angstrom crystal structure of the N97S CaM mutant
Deposited 2018-05-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
1–149(149 aa)
|
Mutation:N97S
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;20% PEG3350, 0.1 M Bis-Tris, pH 6.5
|
Resolution 2.50 Å
R-free 0.279
|
|
6DAH
2.5 Angstrom crystal structure of the N97S CaM mutant
Deposited 2018-05-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain D
1–149(149 aa)
|
Mutation:N97S
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;20% PEG3350, 0.1 M Bis-Tris, pH 6.5
|
Resolution 2.50 Å
R-free 0.279
|
|
6E2F
Cryo-EM structure of human TRPV6 in complex with Calmodulin
Deposited 2018-07-11
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain E
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 6
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.90 Å
|
|
6E2G
Cryo-EM structure of rat TRPV6 in complex with Calmodulin
Deposited 2018-07-11
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain E
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 6
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å
|
|
6EEB
Calmodulin in complex with malbrancheamide
Deposited 2018-08-13
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
J6P (5aS,12aS,13aS)-8,9-dichloro-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one × 1
CA CALCIUM ION × 4
ZN ZINC ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.1 M Tris pH 8.5, 0.2 M MgCl2, 20% (w/v) PEG 8000
|
Resolution 1.96 Å
R-free 0.263
|
|
6EEB
Calmodulin in complex with malbrancheamide
Deposited 2018-08-13
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
J6P (5aS,12aS,13aS)-8,9-dichloro-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one × 2
CA CALCIUM ION × 8
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.1 M Tris pH 8.5, 0.2 M MgCl2, 20% (w/v) PEG 8000
|
Resolution 1.96 Å
R-free 0.263
|
|
6FEG
Solution Structure of CaM/Kv7.2-hAB Complex
Deposited 2018-01-02
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 2
|
SOLUTION NMR
NMR measurement conditions
pH 6;303 K;Ionic strength (raw mmCIF value) 120;Pressure 1
NMR sample composition
1 mM [U-100% 13C; U-100% 15N; U-50% 2H] Kv7.2-hAB, 1 mM [U-100% 13C; U-100% 15N; U-50% 2H] Calmodulin, 120 mM potassium chloride, 20 mM MES, 2 uM sodium azide, 200 uM [U-2H] DSS, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
500 uM [U-100% 13C; U-100% 15N] Kv7.2-hAB, 500 uM Calmodulin, 120 mM potassium chloride, 20 mM MES, 2 uM sodium azide, 200 uM [U-2H] DSS, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
500 uM Kv7.2-hAB, 500 uM [U-100% 13C; U-100% 15N] Calmodulin, 120 mM potassium chloride, 20 mM MES, 2 uM sodium azide, 200 uM [U-2H] DSS, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
250 uM [U-100% 15N] Kv7.2-hAB, 250 uM [U-100% 15N] Calmodulin, 120 mM potassium chloride, 20 mM MES, 2 uM sodium azide, 200 uM [U-2H] DSS, 95% H2O/5% D2O | 95% H2O/5% D2O
|
Resolution not provided
|
|
6FEH
Solution Structure of CaM/Kv7.2-hAB Complex
Deposited 2018-01-02
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
SOLUTION NMR
NMR measurement conditions
pH 6;303 K;Ionic strength (raw mmCIF value) 120;Pressure 1
NMR sample composition
1 mM [U-100% 13C; U-100% 15N; U-50% 2H] Kv7.2-hAB, 1 mM [U-100% 13C; U-100% 15N; U-50% 2H] Calmodulin, 120 mM potassium chloride, 20 mM MES, 5 mM CaCl2, 2 uM sodium azide, 200 uM [U-2H] DSS, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
500 uM [U-100% 13C; U-100% 15N] Kv7.2-hAB, 500 uM Calmodulin, 120 mM potassium chloride, 20 mM MES, 5 mM CaCl2, 2 uM sodium azide, 200 uM [U-2H] DSS, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
250 uM [U-100% 15N] Kv7.2-hAB, 250 uM [U-100% 15N] Calmodulin, 120 mM potassium chloride, 20 mM MES, 5 mM CaCl2, 2 uM sodium azide, 200 uM [U-2H] DSS, 95% H2O/5% D2O | 95% H2O/5% D2O
|
Resolution not provided
|
|
6GDK
Calcium bound form of human calmodulin mutant F141L
Deposited 2018-04-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Mutation:F141L
|
CA CALCIUM ION × 4
|
SOLUTION NMR
NMR measurement conditions
pH 6.45;298.1 K;Ionic strength (raw mmCIF value) 24;Pressure 1
NMR sample composition
0.53 mM [U-13C; U-15N] Calmodulin mutant F141L, 10 mM NA calcium chloride, 10 mM NA potassium chloride, 2 mM NA HEPES, 2 mM NA sodium azide, 0.1 mM NA TSP-d4, 95% H2O/5% D2O | 95% H2O/5% D2O
|
Resolution not provided
|
|
6GDL
Calmodulin mutant - F141L apo-form Unstructured C-domain
Deposited 2018-04-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Mutation:F141L
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 6.55;298.1 K;Ionic strength (raw mmCIF value) 24;Pressure 1
NMR sample composition
580 uM [U-99% 13C; U-99% 15N] Calmodulin, 2 mM HEPES, 10 mM potassium chloride, 10 mM EDTA, 2 mM sodium azide, 95% H2O/5% D2O | 95% H2O/5% D2O
|
Resolution not provided
|
|
6HCS
Crystal structure of CaM-peptide complex containing AzF at position 108
Deposited 2018-08-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5;293 K;PEG 6000, lithium chloride, sodium chloride
|
Resolution 2.00 Å
R-free 0.294
|
|
6HCS
Crystal structure of CaM-peptide complex containing AzF at position 108
Deposited 2018-08-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5;293 K;PEG 6000, lithium chloride, sodium chloride
|
Resolution 2.00 Å
R-free 0.294
|
|
6HCS
Crystal structure of CaM-peptide complex containing AzF at position 108
Deposited 2018-08-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain E
1–149(149 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5;293 K;PEG 6000, lithium chloride, sodium chloride
|
Resolution 2.00 Å
R-free 0.294
|
|
6HCS
Crystal structure of CaM-peptide complex containing AzF at position 108
Deposited 2018-08-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain G
1–149(149 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5;293 K;PEG 6000, lithium chloride, sodium chloride
|
Resolution 2.00 Å
R-free 0.294
|
|
6HR1
Crystal structure of the YFPnano fusion protein
Deposited 2018-09-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
TLA L(+)-TARTARIC ACID × 1
CA CALCIUM ION × 4
EDO 1,2-ETHANEDIOL × 2
GOL GLYCEROL × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 7.8;293 K;24% w/v PEG 3350
0.2 M di-Ammonium tartrate
10% v/v Glycerol
|
Resolution 1.90 Å
R-free 0.214
|
|
6HR1
Crystal structure of the YFPnano fusion protein
Deposited 2018-09-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Insufficient information
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
2–149(148 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 4
EDO 1,2-ETHANEDIOL × 7
GOL GLYCEROL × 2
NA SODIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 7.8;293 K;24% w/v PEG 3350
0.2 M di-Ammonium tartrate
10% v/v Glycerol
|
Resolution 1.90 Å
R-free 0.214
|
|
6JI8
Structure of RyR2 (F/apoCaM dataset)
Deposited 2019-02-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain C
1–149(149 aa)
Chain F
1–149(149 aa)
Chain I
1–149(149 aa)
Chain L
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å
|
|
6JII
Structure of RyR2 (F/A/C/L-Ca2+/apo-CaM-M dataset)
Deposited 2019-02-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain C
1–149(149 aa)
Chain F
1–149(149 aa)
Chain I
1–149(149 aa)
Chain L
1–149(149 aa)
|
Mutation:E32A,E68A,E105A,E141A
Mutation:E32A,E68A,E105A,E141A
Mutation:E32A,E68A,E105A,E141A
Mutation:E32A,E68A,E105A,E141A
|
ZN ZINC ION × 4
CA CALCIUM ION × 4
CFF CAFFEINE × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.20 Å
|
|
6JIU
Structure of RyR2 (F/A/C/L-Ca2+/Ca2+CaM dataset)
Deposited 2019-02-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain C
1–149(149 aa)
Chain F
1–149(149 aa)
Chain I
1–149(149 aa)
Chain L
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 4
CA CALCIUM ION × 12
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
CFF CAFFEINE × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.20 Å
|
|
6JIY
Structure of RyR2 (F/A/C/H-Ca2+/Ca2+CaM dataset)
Deposited 2019-02-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain C
1–149(149 aa)
Chain F
1–149(149 aa)
Chain I
1–149(149 aa)
Chain L
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 4
CA CALCIUM ION × 20
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
CFF CAFFEINE × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.90 Å
|
|
6JRS
Structure of RyR2 (*F/A/C/L-Ca2+/Ca2+-CaM dataset)
Deposited 2019-04-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain C
1–149(149 aa)
Chain F
1–149(149 aa)
Chain I
1–149(149 aa)
Chain L
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 4
CA CALCIUM ION × 12
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
CFF CAFFEINE × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.70 Å
|
|
6JV2
Structure of RyR2 (P/L-Ca2+/Ca2+-CaM dataset)
Deposited 2019-04-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 4
CA CALCIUM ION × 20
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.40 Å
|
|
6K4K
Crystal structure of SidJ-CaM binary complex at 2.71 A
Deposited 2019-05-24
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;299 K;20% PEG 3350, 0.2M NaI
|
Resolution 2.71 Å
R-free 0.243
|
|
6K4K
Crystal structure of SidJ-CaM binary complex at 2.71 A
Deposited 2019-05-24
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;299 K;20% PEG 3350, 0.2M NaI
|
Resolution 2.71 Å
R-free 0.243
|
|
6K4L
Crystal structure of Se-labelled SidJ complex with CaM at 2.95 A
Deposited 2019-05-24
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Not recorded
|
CL CHLORIDE ION × 2
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.5;299 K;25% PEG 3350, 0.2M NaI
|
Resolution 2.95 Å
R-free 0.269
|
|
6K4L
Crystal structure of Se-labelled SidJ complex with CaM at 2.95 A
Deposited 2019-05-24
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
1–149(149 aa)
|
Not recorded
|
CL CHLORIDE ION × 2
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.5;299 K;25% PEG 3350, 0.2M NaI
|
Resolution 2.95 Å
R-free 0.269
|
|
6K4R
Crystal structure of SidJ-CaM-AMP ternary complex at 3.11 A
Deposited 2019-05-26
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Not recorded
|
AMP ADENOSINE MONOPHOSPHATE × 1
CL CHLORIDE ION × 2
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.5;299 K;25% PEG 3350, 0.2M NaI, 0.1M HEPES 7.5
|
Resolution 3.11 Å
R-free 0.279
|
|
6K4R
Crystal structure of SidJ-CaM-AMP ternary complex at 3.11 A
Deposited 2019-05-26
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
1–149(149 aa)
|
Not recorded
|
AMP ADENOSINE MONOPHOSPHATE × 1
CL CHLORIDE ION × 2
PG4 TETRAETHYLENE GLYCOL × 2
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.5;299 K;25% PEG 3350, 0.2M NaI, 0.1M HEPES 7.5
|
Resolution 3.11 Å
R-free 0.279
|
|
6M2W
Structure of RyR1 (Ca2+/Caffeine/ATP/CaM1234/CHL)
Deposited 2020-03-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain C
1–149(149 aa)
Chain F
1–149(149 aa)
Chain I
1–149(149 aa)
Chain L
1–149(149 aa)
|
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
|
CFF CAFFEINE × 4
CA CALCIUM ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
ZN ZINC ION × 4
F0U 5-bromanyl-N-[4-chloranyl-2-methyl-6-(methylcarbamoyl)phenyl]-2-(3-chloranylpyridin-2-yl)pyrazole-3-carboxamide × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.80 Å
|
|
6M7H
Structure of calmodulin with KN93
Deposited 2018-08-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–148(147 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
KN9 N-[2-[[[3-(4'-Chlorophenyl)-2-propenyl]methylamino]methyl]phenyl]-N-(2-hydroxyethyl)-4'-methoxybenzenesulfonamide × 3
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;289 K;bis tris ph 6.5, peg 3350
|
Resolution 1.60 Å
R-free 0.267
|
|
6MUD
Voltage-gated sodium channel NaV1.5 C-terminal domain in complex with Ca2+/Calmodulin
Deposited 2018-10-23
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9.5;277 K;5-15 % (w/v) PEG 4000, 0.1 M Tris, pH 9.5, 0.1 M MgCl2, and 5 % (v/v) isopropanol
|
Resolution 2.69 Å
R-free 0.269
|
|
6MUE
Voltage-gated sodium channel NaV1.4 IQ domain in complex with Ca2+/Calmodulin
Deposited 2018-10-23
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;0.1 M MES pH 6.0 and 55 % (v/v) isopropanol
|
Resolution 1.90 Å
R-free 0.260
|
|
6N5W
Crystal structure of the Ca2+/CaM complex with independent peptides of Kv7.4 (KCNQ4) A & B domains
Deposited 2018-11-22
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain C
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;295 K;1.3 M sodium citrate, 0.1 M HEPES pH 7.0
|
Resolution 2.15 Å
R-free 0.274
|
|
6O5G
Calmodulin in complex with isomalbrancheamide D
Deposited 2019-03-02
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
LMJ (5aS,12aS,13aS)-9-bromo-8-chloro-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7 ,6-b]carbazol-14-one × 1
CA CALCIUM ION × 4
ZN ZINC ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8.5;293 K;0.1 M Tris pH 8.5, 0.2 M MgCl2, 20% PEG 8000
|
Resolution 1.89 Å
R-free 0.226
|
|
6OS4
Calmodulin in complex with farnesyl cysteine methyl ester
Deposited 2019-05-01
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 4
5U0 s-farnesyl-l-cysteine methyl ester × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;0.2mM sodium acetate, 0.1mM cacodylate, 28% PEG 8000
|
Resolution 2.05 Å
R-free 0.225
|
|
6OS4
Calmodulin in complex with farnesyl cysteine methyl ester
Deposited 2019-05-01
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 8
5U0 s-farnesyl-l-cysteine methyl ester × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;0.2mM sodium acetate, 0.1mM cacodylate, 28% PEG 8000
|
Resolution 2.05 Å
R-free 0.225
|
|
6PAW
Crystal structure of DAPK2 S308A Calcium/Calmodulin complex
Deposited 2019-06-12
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;292.15 K;0.1 M Bis-Tris-HCl, pH 6.5, 0.6 M sodium chloride, 14.3% PEG3350
|
Resolution 2.95 Å
R-free 0.288
|
|
6PAW
Crystal structure of DAPK2 S308A Calcium/Calmodulin complex
Deposited 2019-06-12
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;292.15 K;0.1 M Bis-Tris-HCl, pH 6.5, 0.6 M sodium chloride, 14.3% PEG3350
|
Resolution 2.95 Å
R-free 0.288
|
|
6PAW
Crystal structure of DAPK2 S308A Calcium/Calmodulin complex
Deposited 2019-06-12
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain H
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;292.15 K;0.1 M Bis-Tris-HCl, pH 6.5, 0.6 M sodium chloride, 14.3% PEG3350
|
Resolution 2.95 Å
R-free 0.288
|
|
6PAW
Crystal structure of DAPK2 S308A Calcium/Calmodulin complex
Deposited 2019-06-12
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain G
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;292.15 K;0.1 M Bis-Tris-HCl, pH 6.5, 0.6 M sodium chloride, 14.3% PEG3350
|
Resolution 2.95 Å
R-free 0.288
|
|
6PBX
Single particle cryo-EM structure of the voltage-gated K+ channel Eag1 3-13 deletion mutant bound to calmodulin (conformation 2)
Deposited 2019-06-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.00 Å
|
|
6PBY
Single particle cryo-EM structure of the voltage-gated K+ channel Eag1 3-13 deletion mutant bound to calmodulin (conformation 1)
Deposited 2019-06-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.67 Å
|
|
6U39
2.4 Angstrom crystal structure of the D129G Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Mutation:D129G
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;ammonium sulfate
|
Resolution 2.40 Å
R-free 0.283
|
|
6U39
2.4 Angstrom crystal structure of the D129G Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 10
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain S
2–149(148 aa)
|
Mutation:D129G
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;ammonium sulfate
|
Resolution 2.40 Å
R-free 0.283
|
|
6U39
2.4 Angstrom crystal structure of the D129G Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
2–149(148 aa)
|
Mutation:D129G
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;ammonium sulfate
|
Resolution 2.40 Å
R-free 0.283
|
|
6U39
2.4 Angstrom crystal structure of the D129G Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain E
2–149(148 aa)
|
Mutation:D129G
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;ammonium sulfate
|
Resolution 2.40 Å
R-free 0.283
|
|
6U39
2.4 Angstrom crystal structure of the D129G Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain G
2–149(148 aa)
|
Mutation:D129G
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;ammonium sulfate
|
Resolution 2.40 Å
R-free 0.283
|
|
6U39
2.4 Angstrom crystal structure of the D129G Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 5
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain I
2–149(148 aa)
|
Mutation:D129G
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;ammonium sulfate
|
Resolution 2.40 Å
R-free 0.283
|
|
6U39
2.4 Angstrom crystal structure of the D129G Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 6
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain K
2–149(148 aa)
|
Mutation:D129G
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;ammonium sulfate
|
Resolution 2.40 Å
R-free 0.283
|
|
6U39
2.4 Angstrom crystal structure of the D129G Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 7
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain M
2–149(148 aa)
|
Mutation:D129G
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;ammonium sulfate
|
Resolution 2.40 Å
R-free 0.283
|
|
6U39
2.4 Angstrom crystal structure of the D129G Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 8
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain O
2–149(148 aa)
|
Mutation:D129G
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;ammonium sulfate
|
Resolution 2.40 Å
R-free 0.283
|
|
6U39
2.4 Angstrom crystal structure of the D129G Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 9
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain Q
2–149(148 aa)
|
Mutation:D129G
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;ammonium sulfate
|
Resolution 2.40 Å
R-free 0.283
|
|
6U3A
1.65 Angstrom crystal structure of the N97S Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Mutation:N97S
|
CA CALCIUM ION × 3
NA SODIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;277 K;DL-malic acid
|
Resolution 1.65 Å
R-free 0.209
|
|
6U3A
1.65 Angstrom crystal structure of the N97S Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
2–149(148 aa)
|
Mutation:N97S
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;277 K;DL-malic acid
|
Resolution 1.65 Å
R-free 0.209
|
|
6U3B
1.7 Angstrom crystal structure of the Q135P Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Mutation:Q135P
|
CA CALCIUM ION × 5
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;PEG 550 MME, sodium acetate
|
Resolution 1.70 Å
R-free 0.200
|
|
6U3D
1.75 Angstrom crystal structure of the N53I Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Mutation:N53I
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;PEG 3350, citric acid
|
Resolution 1.75 Å
R-free 0.201
|
|
6U3D
1.75 Angstrom crystal structure of the N53I Ca-CaM:CaV1.2 IQ domain complex
Deposited 2019-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
2–149(148 aa)
|
Mutation:N53I
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298 K;PEG 3350, citric acid
|
Resolution 1.75 Å
R-free 0.201
|
|
6UZZ
structure of human KCNQ1-CaM complex
Deposited 2019-11-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.10 Å
|
|
6V00
structure of human KCNQ1-KCNE3-CaM complex
Deposited 2019-11-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain B
1–149(149 aa)
Chain E
1–149(149 aa)
Chain H
1–149(149 aa)
Chain K
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.10 Å
|
|
6V01
structure of human KCNQ1-KCNE3-CaM complex with PIP2
Deposited 2019-11-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain B
1–149(149 aa)
Chain E
1–149(149 aa)
Chain H
1–149(149 aa)
Chain K
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 8
PT5 [(2R)-1-octadecanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phospho ryl]oxy-propan-2-yl] (8Z)-icosa-5,8,11,14-tetraenoate × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.90 Å
|
|
6X32
Wt pig RyR1 in complex with apoCaM, EGTA condition (class 1 and 2, closed)
Deposited 2020-05-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain C
3–148(146 aa)
Chain F
3–148(146 aa)
Chain I
3–148(146 aa)
Chain L
3–148(146 aa)
|
Not recorded
|
ZN ZINC ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.80 Å
|
|
6X33
Wt pig RyR1 in complex with apoCaM, EGTA condition (class 3, open)
Deposited 2020-05-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain C
1–148(148 aa)
Chain F
1–148(148 aa)
Chain I
1–148(148 aa)
Chain L
1–148(148 aa)
|
Not recorded
|
ZN ZINC ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.20 Å
|
|
6X35
Pig R615C RyR1 in complex with CaM, EGTA (class 1, open)
Deposited 2020-05-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain C
1–148(148 aa)
Chain F
1–148(148 aa)
Chain I
1–148(148 aa)
Chain L
1–148(148 aa)
|
Not recorded
|
ZN ZINC ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.20 Å
|
|
6X36
Pig R615C RyR1 in complex with CaM, EGTA (class 3, closed)
Deposited 2020-05-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain C
1–148(148 aa)
Chain F
1–148(148 aa)
Chain I
1–148(148 aa)
Chain L
1–148(148 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.70 Å
|
|
6XXX
1.25 Angstrom crystal structure of Ca/CaM A102V:RyR2 peptide complex
Deposited 2020-01-28
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain AAA
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.1 M Sodium acetate trihydrate pH 4.0, 25% w/v Polyethylene glycol 1,500
|
Resolution 1.25 Å
R-free 0.189
|
|
6XY3
2.0 Angstrom crystal structure of Ca/CaM N53I:RyR2 peptide complex
Deposited 2020-01-29
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain AAA
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.1 M Sodium acetate trihydrate pH 4.5, 10% w/v Polyethylene glycol 10,000
|
Resolution 2.00 Å
R-free 0.260
|
|
6XYR
Structure of the T4Lnano fusion protein
Deposited 2020-01-31
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 5
GOL GLYCEROL × 5
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293.15 K;8% PEG 8000, 200 mM LiCl2, 100 mM Tris pH 8.0, 15% Glycerol
|
Resolution 2.08 Å
R-free 0.236
|
|
6Y4P
Calmodulin N53I variant bound to cardiac ryanodine receptor (RyR2) calmodulin binding domain
Deposited 2020-02-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Mutation:N53I
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.1 M Sodium Acetate pH 4.70 and 23 % PEG 550 MME
|
Resolution 2.13 Å
R-free 0.246
|
|
6Y94
Ca2+-bound Calmodulin mutant N53I
Deposited 2020-03-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Mutation:N53I
|
CA CALCIUM ION × 4
|
SOLUTION NMR
NMR measurement conditions
pH 6.57;298.1 K;Ionic strength (raw mmCIF value) 182;Pressure 1
NMR measurement conditions
pH 6.57;298.1 K;Ionic strength (raw mmCIF value) 42;Pressure 1
NMR measurement conditions
pH 6.57;298.1 K;Ionic strength (raw mmCIF value) 42;Pressure 1
NMR sample composition
0.56 mM [U-99% 13C; U-99% 15N] Calmodulin N53I, 2 mM HEPES, 100 mM potassium chloride, 10 mM calcium chloride, 50 mM sodium acetate, 2 mM sodium azide, 0.05 mM TSP, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
1.0 mM [U-99% 15N] Calmodulin N53I, 2 mM HEPES, 10 mM potassium chloride, 10 mM calcium chloride, 2 mM sodium azide, 0.05 mM TSP, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
1.0 mM [U-99% 13C; U-99% 15N] Calmodulin, 2 mM HEPES, 10 mM potassium chloride, 10 mM calcium chloride, 2 mM sodium azide, 0.05 mM TSP, 95% H2O/5% D2O | 95% H2O/5% D2O
|
Resolution not provided
|
|
6Y95
Ca2+-free Calmodulin mutant N53I
Deposited 2020-03-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Mutation:N53I
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 6.3;298.1 K;Ionic strength (raw mmCIF value) 105;Pressure 1
NMR measurement conditions
pH 6.56;298.1 K;Ionic strength (raw mmCIF value) 42;Pressure 1
NMR measurement conditions
pH 6.53;298.1 K;Ionic strength (raw mmCIF value) 42;Pressure 1
NMR sample composition
1.9 mM [U-99% 13C; U-99% 15N] Calmodulin N53I, 20 mM HEPES, 100 mM potassium chloride, 1 mM EDTA, 2 mM sodium azide, 0.05 mM TSP, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
1.2 mM [U-99% 15N] Calmodulin N53I, 2 mM HEPES, 10 mM potassium chloride, 10 mM EDTA, 2 mM sodium azide, 0.05 mM TSP, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
1.2 mM [U-99% 13C; U-99% 15N] Calmodulin, 2 mM HEPES, 10 mM potassium chloride, 10 mM EDTA, 2 mM sodium azide, 0.05 mM TSP, 95% H2O/5% D2O | 95% H2O/5% D2O
|
Resolution not provided
|
|
6YNS
CaM-P458 complex (crystal form 2)
Deposited 2020-04-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain A
2–149(148 aa)
Chain C
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 6
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;300 K;0.2M of MgCl2
0.1M HEPES-HCl pH 7.5
25% (w/v) PEG3350
|
Resolution 3.94 Å
R-free 0.284
|
|
6YNS
CaM-P458 complex (crystal form 2)
Deposited 2020-04-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
2–149(148 aa)
Chain K
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 8
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;300 K;0.2M of MgCl2
0.1M HEPES-HCl pH 7.5
25% (w/v) PEG3350
|
Resolution 3.94 Å
R-free 0.284
|
|
6YNS
CaM-P458 complex (crystal form 2)
Deposited 2020-04-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain D
2–149(148 aa)
Chain E
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;300 K;0.2M of MgCl2
0.1M HEPES-HCl pH 7.5
25% (w/v) PEG3350
|
Resolution 3.94 Å
R-free 0.284
|
|
6YNS
CaM-P458 complex (crystal form 2)
Deposited 2020-04-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain F
2–149(148 aa)
Chain G
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;300 K;0.2M of MgCl2
0.1M HEPES-HCl pH 7.5
25% (w/v) PEG3350
|
Resolution 3.94 Å
R-free 0.284
|
|
6YNS
CaM-P458 complex (crystal form 2)
Deposited 2020-04-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 5
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain H
2–149(148 aa)
Chain I
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;300 K;0.2M of MgCl2
0.1M HEPES-HCl pH 7.5
25% (w/v) PEG3350
|
Resolution 3.94 Å
R-free 0.284
|
|
6YNS
CaM-P458 complex (crystal form 2)
Deposited 2020-04-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 6
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain J
2–149(148 aa)
Chain L
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;300 K;0.2M of MgCl2
0.1M HEPES-HCl pH 7.5
25% (w/v) PEG3350
|
Resolution 3.94 Å
R-free 0.284
|
|
6YNU
CaM-P458 complex (crystal form 1)
Deposited 2020-04-14
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 5
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;300 K;0.3 M Ammonium sulfate
30% (w/v) PEG 4000
|
Resolution 3.12 Å
R-free 0.291
|
|
6YNU
CaM-P458 complex (crystal form 1)
Deposited 2020-04-14
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;300 K;0.3 M Ammonium sulfate
30% (w/v) PEG 4000
|
Resolution 3.12 Å
R-free 0.291
|
|
6ZBI
Ternary complex of Calmodulin bound to 2 molecules of NHE1
Deposited 2020-06-08
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain A
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
SOLUTION NMR
NMR measurement conditions
pH 7.5;310 K;Ionic strength (raw mmCIF value) 120;Pressure 1
NMR sample composition
0.5 mM [U-99% 13C; U-99% 15N] Calmodulin, 1.15 mM Sodium/Hydrogen exchanger 1 (NHE1, SLC9A1), 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
1 mM [U-99% 13C; U-99% 15N] Sodium/Hydrogen exchanger 1 (NHE1, SLC9A1), 0.5 mM Calmodulin, 95% H2O/5% D2O | 95% H2O/5% D2O
|
Resolution not provided
|
|
7BF1
Ca2+-Calmodulin in complex with peptide from brain-type creatine kinase in extended 1:2 binding mode
Deposited 2020-12-31
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain AAA
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 4
ACE ACETYL GROUP × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;25% PEG 1500, 0.1 M SPG buffer pH 4-5.
CaM-CKBpeptide ratios of 1:4
|
Resolution 1.24 Å
R-free 0.186
|
|
7BF2
Ca2+-Calmodulin in complex with human muscle form creatine kinase peptide in extended 1:2 binding mode
Deposited 2020-12-31
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain AAA
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 4.5;293 K;25% PEG 1500, 0.1 M SPG buffer pH 4-5.
CaM-CKBpeptide ratios of 1:4
|
Resolution 1.43 Å
R-free 0.228
|
|
7KL5
Structure of Calmodulin Bound to the Cardiac Ryanodine Receptor (RyR2) at Residues: Phe4246 to Val4271
Deposited 2020-10-29
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 5
EDO 1,2-ETHANEDIOL × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8.5;277 K;0.2M sodium acetate, 0.1M Tris pH 8.5, 30%(w/v) PEG 4000
|
Resolution 1.65 Å
R-free 0.245
|
|
7L8V
NMR Structure of half-calcified calmodulin mutant (CaMEF12) bound to the IQ-motif of CaV1.2
Deposited 2021-01-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Mutation:D21A, D23A, D25A, E32Q, D57A, D59A, N61A, E68Q
|
CA CALCIUM ION × 2
|
SOLUTION NMR
NMR measurement conditions
pH 7.4;303 K;Ionic strength (raw mmCIF value) 0.1;Pressure 1
NMR sample composition
0.5 mM [U-95% 15N] calmodulin, 0.75 mM IQ-motif, 10 mM TRIS, 2 mM CALCIUM ION, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
0.5 mM [U-13C; U-15N] calmodulin, 0.75 mM IQ-motif, 10 mM TRIS, 2 mM CALCIUM ION, 90% H2O/10% D2O | 90% H2O/10% D2O
|
Resolution not provided
|
|
7PSZ
Crystal structure of CaM in complex with CDZ (form 1)
Deposited 2021-09-24
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Not recorded
|
85H 1-[bis(4-chlorophenyl)methyl]-3-[(2~{R})-2-(2,4-dichlorophenyl)-2-[(2,4-dichlorophenyl)methoxy]ethyl]imidazole × 1
SO4 SULFATE ION × 1
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;292 K;30 %w/v PEG 8K and 0.2 M (NH4)2SO4
|
Resolution 1.90 Å
R-free 0.251
|
|
7PU9
Crystal structure of CaM in complex with CDZ (form 2)
Deposited 2021-09-28
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Not recorded
|
85H 1-[bis(4-chlorophenyl)methyl]-3-[(2~{R})-2-(2,4-dichlorophenyl)-2-[(2,4-dichlorophenyl)methoxy]ethyl]imidazole × 2
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;292 K;0.2 M CaCl2, 0.1 M Tris pH 8.5 and 25 %w/v PEG 4K
|
Resolution 2.28 Å
R-free 0.266
|
|
7SHQ
Structure of a functional construct of eukaryotic elongation factor 2 kinase in complex with calmodulin.
Deposited 2021-10-11
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
2–149(148 aa)
|
Not recorded
|
ZN ZINC ION × 1
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
MICROBATCH;pH 6.9;298.15 K;Cocktail solution:
Peg3350: 24%
MgCl2: 300 mM
BisTris pH 6.9: 100 mM
Protein Solution:
11 mg/mL CaM-eEF2Kp1/1
Tris pH 7.5: 20 mM
NaCl: 0.1 M
CaCl2: 3mM
TCEP: 1mM
MgCl2: 1.5 mM
AMPPNP: 1.0 mM
Crystallization conditions: 1/1 Protein/Cocktail under Paraffin Oil in a Greiner 72-Well microbatch plate
|
Resolution 2.34 Å
R-free 0.252
|
|
7SX3
Human NALCN-FAM155A-UNC79-UNC80 channelosome with CaM bound, conformation 1/2
Deposited 2021-11-22
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain C
1–149(149 aa)
|
Not recorded
|
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2
PEV (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE × 4
PGV (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 2
Y01 CHOLESTEROL HEMISUCCINATE × 3
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE;3.5 sec blotting
|
Resolution 3.10 Å
|
|
7SX4
Human NALCN-FAM155A-UNC79-UNC80 channelosome with CaM bound, conformation 2/2
Deposited 2021-11-22
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain C
1–149(149 aa)
|
Not recorded
|
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2
PEV (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE × 1
PGV (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 1
Y01 CHOLESTEROL HEMISUCCINATE × 3
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE;3.5 sec blotting
|
Resolution 3.50 Å
|
|
7T2Q
PEGylated Calmodulin-1 (K148U)
Deposited 2021-12-06
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 4
MG MAGNESIUM ION × 2
ZN ZINC ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.2 M Magnesium chloride hexahydrate, 0.1 M Tris pH 8.5, 20% w/v PEG 8000
|
Resolution 1.95 Å
R-free 0.258
|
|
7T2Q
PEGylated Calmodulin-1 (K148U)
Deposited 2021-12-06
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 8
MG MAGNESIUM ION × 4
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.2 M Magnesium chloride hexahydrate, 0.1 M Tris pH 8.5, 20% w/v PEG 8000
|
Resolution 1.95 Å
R-free 0.258
|
|
7TCI
Structure of Xenopus KCNQ1-CaM in complex with ML277
Deposited 2021-12-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
I0S (2R)-N-[4-(4-methoxyphenyl)-1,3-thiazol-2-yl]-1-(4-methylbenzene-1-sulfonyl)piperidine-2-carboxamide × 4
CA CALCIUM ION × 12
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.2
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.90 Å
|
|
7TCP
Structure of Xenopus KCNQ1-CaM
Deposited 2021-12-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 12
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.2
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.84 Å
|
|
7TZC
A drug and ATP binding site in type 1 ryanodine receptor
Deposited 2022-02-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain C
1–149(149 aa)
Chain D
1–149(149 aa)
Chain E
1–149(149 aa)
Chain K
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 20
ATP ADENOSINE-5'-TRIPHOSPHATE × 8
ZN ZINC ION × 4
CFF CAFFEINE × 4
KVR 4-[(7-methoxy-2,3-dihydro-1,4-benzothiazepin-4(5H)-yl)methyl]benzoic acid × 4
L9R (2S)-3-(octadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.45 Å
|
|
7U9T
Structure of PKA phosphorylated human RyR2 in the closed state in the presence of Calmodulin
Deposited 2022-03-11
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain I
1–149(149 aa)
Chain J
1–149(149 aa)
Chain K
1–149(149 aa)
Chain L
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4;Xanthine was made fresh to avoid aggregation. Xanthine stock solution was 10 mM in NaOH 0.5 N.
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.68 Å
|
|
7UA3
Structure of PKA phosphorylated human RyR2-R2474S in the closed state in the presence of Calmodulin
Deposited 2022-03-11
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain I
1–149(149 aa)
Chain J
1–149(149 aa)
Chain K
1–149(149 aa)
Chain L
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4;Xanthine was made fresh to avoid aggregation. Xanthine stock solution was 10 mM in NaOH 0.5 N.
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.97 Å
|
|
7UA4
Structure of PKA phosphorylated human RyR2-R2474S in the open state in the presence of Calmodulin
Deposited 2022-03-11
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain I
1–149(149 aa)
Chain J
1–149(149 aa)
Chain K
1–149(149 aa)
Chain L
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 8
CA CALCIUM ION × 4
XAN XANTHINE × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4;Xanthine was made fresh to avoid aggregation. Xanthine stock solution was 10 mM in NaOH 0.5 N.
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.93 Å
|
|
7VMB
Crystal structure of IQSEC1-IQ motif, Sec7PH tandem in complex with calmodulin
Deposited 2021-10-08
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain C
1–149(149 aa)
|
Not recorded
|
GOL GLYCEROL × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.5;289.15 K;0.1M HEPES pH 7.5, 4% w/v Polyethylene glycol 8000
|
Resolution 2.00 Å
R-free 0.252
|
|
7VUO
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation F141L
Deposited 2021-11-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
2–149(148 aa)
|
Mutation:F141L
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8.5;291 K;0.1M Tris8.5
25% w/v Polyethylene glycol 3,350
0.2M Trimethylamine N-oxide dihydrate
|
Resolution 2.68 Å
R-free 0.274
|
|
7VVD
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation Q135P
Deposited 2021-11-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Mutation:Q135P
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;291 K;25% PEG 1500, 0.1M MMT pH 8.0
|
Resolution 3.13 Å
R-free 0.274
|
|
7VVD
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation Q135P
Deposited 2021-11-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain E
1–149(149 aa)
|
Mutation:Q135P
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;291 K;25% PEG 1500, 0.1M MMT pH 8.0
|
Resolution 3.13 Å
R-free 0.274
|
|
7VVH
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation E140G
Deposited 2021-11-06
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
Fragment:E141G
|
Not recorded
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;291 K;25% PEG 1500, 0.1M MMT pH 9.0
|
Resolution 2.30 Å
R-free 0.272
|
|
7WJI
Architecture of the human NALCN channelosome
Deposited 2022-01-06
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain E
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.50 Å
|
|
7WR3
Crystal structure of MBP-fused OspC3 in complex with calmodulin
Deposited 2022-01-26
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Not recorded
|
SO4 SULFATE ION × 2
NCA NICOTINAMIDE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;20% PEG3350, 0.1 M Tris pH 8.2-8.4, 0.2 M Lithium Sulfate, 0.7% 1-Butanol
|
Resolution 1.87 Å
R-free 0.228
|
|
7WR3
Crystal structure of MBP-fused OspC3 in complex with calmodulin
Deposited 2022-01-26
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Insufficient information
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
1–149(149 aa)
|
Not recorded
|
SO4 SULFATE ION × 2
NCA NICOTINAMIDE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;20% PEG3350, 0.1 M Tris pH 8.2-8.4, 0.2 M Lithium Sulfate, 0.7% 1-Butanol
|
Resolution 1.87 Å
R-free 0.228
|
|
7WR4
Crystal structure of OspC3-calmodulin-caspase-4 complex
Deposited 2022-01-26
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;25% PEG3350, 0.1 M HEPES pH 7.4, 0.2 M Ammonium sulfate, 0.3 M NDSB-195
|
Resolution 2.75 Å
R-free 0.270
|
|
7WR5
Crystal structure of OspC3-calmodulin-caspase-4 complex binding with 2'-aF-NAD+
Deposited 2022-01-26
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–149(149 aa)
|
Not recorded
|
5ZV [[(2~{R},3~{R},4~{S},5~{R})-5-(3-aminocarbonylpyridin-1-yl)-4-fluoranyl-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;20% PEG3350, 0.2 M Potassium acetate
|
Resolution 3.10 Å
R-free 0.272
|
|
7WZS
Crystal structure of Chromobacterium violaceum effector CopC in complex with host calmodulin and caspase-7
Deposited 2022-02-19
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain C
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.5;291 K;100 mM Bis-Tris propane pH 7.5, 1.5 M lithium sulfate
|
Resolution 3.60 Å
R-free 0.314
|
|
7XN4
Cryo-EM structure of CopC-CaM-caspase-3 with NAD+
Deposited 2022-04-28
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain D
1–149(149 aa)
|
Not recorded
|
NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.35 Å
|
|
7XN5
Cryo-EM structure of CopC-CaM-caspase-3 with ADPR
Deposited 2022-04-28
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain D
1–149(149 aa)
|
Not recorded
|
NCA NICOTINAMIDE × 1
APR ADENOSINE-5-DIPHOSPHORIBOSE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.18 Å
|
|
7XN6
Cryo-EM structure of CopC-CaM-caspase-3 with ADPR-deacylization
Deposited 2022-04-28
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain D
1–149(149 aa)
|
Not recorded
|
NCA NICOTINAMIDE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.45 Å
|
|
7ZRP
2.65 Angstrom crystal structure of Ca/CaM:CaMKIIdelta peptide complex
Deposited 2022-05-04
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 4
PG4 TETRAETHYLENE GLYCOL × 2
IMD IMIDAZOLE × 1
ZN ZINC ION × 5
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;292 K;200 mM Zinc acetate, 100 mM Imidazole pH8.0, 18% PEG3000
|
Resolution 2.65 Å
R-free 0.272
|
|
7ZRP
2.65 Angstrom crystal structure of Ca/CaM:CaMKIIdelta peptide complex
Deposited 2022-05-04
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
2–149(148 aa)
|
Not recorded
|
CA CALCIUM ION × 4
IMD IMIDAZOLE × 1
ZN ZINC ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;292 K;200 mM Zinc acetate, 100 mM Imidazole pH8.0, 18% PEG3000
|
Resolution 2.65 Å
R-free 0.272
|
|
7ZRQ
1.68 Angstrom crystal structure of Ca/CaM-E140G:CaMKIIdelta peptide complex
Deposited 2022-05-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–149(148 aa)
|
Mutation:E140G
|
CA CALCIUM ION × 4
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;292 K;0.1 M Na+-HEPES, 0.1 M MOPS (acid), pH 7.5, 0.03 M magnesium chloride hexahydrate, 0.03 M calcium chloride dihydrate, 12.5% v/v MPD; 12.5% PEG 1000; 12.5% w/v PEG 3350
|
Resolution 1.68 Å
R-free 0.244
|
|
8AHS
Crystal structure of human Ca2+/Calmodulin in complex with melittin
Deposited 2022-07-22
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5.4;293 K;0.2M NaCl, 22w/v% PEG3350, 0.1M Bis-Tris, pH 5.4
|
Resolution 2.48 Å
R-free 0.270
|
|
8B6Q
X-ray structure of the haloalkane dehalogenase HaloTag7 with an insertion of Calmodulin-M13 fusion at position 154-156 that mimic the structure of CaProLa, an calcium gated protein labeling technology
Deposited 2022-09-27
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
3–148(146 aa)
|
Not recorded
|
CL CHLORIDE ION × 1
CA CALCIUM ION × 6
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;293 K;0.1 M MES pH 6.0, 0.2 M calcium acetate, 18% (m/v) PEG 8000
|
Resolution 2.60 Å
R-free 0.318
|
|
8BFG
Solution structure of human apo/Calmodulin G113R (G114R)
Deposited 2022-10-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Mutation:G113R
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 6.64;298.1 K;Ionic strength (raw mmCIF value) 128;Pressure 1
NMR sample composition
1.2 mM aa 81-148: U-13C,15N Calmodulin G113R, 5 mM EDTA, 100 mM potassium chloride, 2 mM NaN3, 20 mM HEPES, 0.1 mM TSP-d4, 95% H2O/5% D2O | 95% H2O/5% D2O
|
Resolution not provided
|
|
8DGH
NMR Structure of calmodulin bound to C-terminal site in the beta-subunit of cyclic nucleotide-gated channel
Deposited 2022-06-23
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 7;308 K;Ionic strength (raw mmCIF value) 1;Pressure 1
NMR sample composition
0.4 mM [U-100% 13C; U-100% 15N] Calmodulin, 1.2 mM Cyclic nucleotide-gated cation channel beta-1, 20 mM [U-100% 2H] TRIS, 1 mM Calcium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
0.4 mM [U-100% 13C; U-100% 15N] Calmodulin, 1.2 mM Cyclic nucleotide-gated cation channel beta-1, 20 mM [U-100% 2H] TRIS, 1 mM Calcium chloride, 100% D2O | 100% D2O
|
Resolution not provided
|
|
8DGK
NMR structure of calmodulin bound to N-terminal site in the beta-subunit of cyclic nucleotide-gated channel
Deposited 2022-06-23
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 7;308 K;Ionic strength (raw mmCIF value) 1;Pressure 1
NMR sample composition
0.5 mM [U-100% 13C; U-100% 15N] Calmodulin, 0.85 mM Cyclic nucleotide-gated cation channel beta-1, 20 mM [U-100% 2H] TRIS, 1 mM Calcium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
0.5 mM [U-100% 13C; U-100% 15N] Calmodulin, 0.85 mM Cyclic nucleotide-gated cation channel beta-1, 20 mM [U-100% 2H] TRIS, 1 mM Calcium chloride, 100% D2O | 100% D2O
NMR sample composition
0.5 mM [U-10% 13C; U-100% 15N] Calmodulin, 0.85 mM Cyclic nucleotide-gated cation channel beta-1, 20 mM [U-100% 2H] TRIS, 1 mM Calcium chloride, 100% D2O | 100% D2O
|
Resolution not provided
|
|
8DUJ
Global map in C1 of RyR1 particles in complex with ImperaCalcin
Deposited 2022-07-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 13
PDB declaration: tridecameric
|
Chain C
1–149(149 aa)
Chain F
1–149(149 aa)
Chain I
1–149(149 aa)
Chain L
1–149(149 aa)
|
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
|
CFF CAFFEINE × 4
CA CALCIUM ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
ZN ZINC ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.70 Å
|
|
8DVE
RyR1 in presence of IpCa-T26E phosphomimetic and activating ligands
Deposited 2022-07-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain C
1–149(149 aa)
Chain F
1–149(149 aa)
Chain I
1–149(149 aa)
Chain L
1–149(149 aa)
|
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
|
CFF CAFFEINE × 4
CA CALCIUM ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
ZN ZINC ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.84 Å
|
|
8EOW
Eag Kv channel with voltage sensor in the up conformation
Deposited 2022-10-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
7–148(142 aa)
Chain F
7–148(142 aa)
Chain G
7–148(142 aa)
Chain H
7–148(142 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.90 Å
|
|
8EP0
Eag Kv channel with voltage sensor in the intermediate conformation
Deposited 2022-10-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
7–148(142 aa)
Chain F
7–148(142 aa)
Chain G
7–148(142 aa)
Chain H
7–148(142 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.90 Å
|
|
8EP1
Eag Kv channel with voltage sensor in the down conformation
Deposited 2022-10-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
7–148(142 aa)
Chain F
7–148(142 aa)
Chain G
7–148(142 aa)
Chain H
7–148(142 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.40 Å
|
|
8FNY
Nucleotide-bound structure of a functional construct of eukaryotic elongation factor 2 kinase.
Deposited 2022-12-28
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
2–149(148 aa)
|
Not recorded
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
ZN ZINC ION × 1
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 7.5;293 K;100 mM Bis-trispropane, 100 mM NaF, 20.5 % w/v PEG-3350 (2protein/1solution)
|
Resolution 2.22 Å
R-free 0.229
|
|
8FNY
Nucleotide-bound structure of a functional construct of eukaryotic elongation factor 2 kinase.
Deposited 2022-12-28
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
2–149(148 aa)
|
Not recorded
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
ZN ZINC ION × 1
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 7.5;293 K;100 mM Bis-trispropane, 100 mM NaF, 20.5 % w/v PEG-3350 (2protein/1solution)
|
Resolution 2.22 Å
R-free 0.229
|
|
8FO6
Nucleotide-free structure of a functional construct of eukaryotic elongation factor 2 kinase.
Deposited 2022-12-29
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
2–149(148 aa)
|
Not recorded
|
ZN ZINC ION × 1
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 5.9;293 K;100 mM Bis-trispropane, 200 mM NaF, 17.6% PEG-3350 (2protein 1solution)
|
Resolution 2.55 Å
R-free 0.231
|
|
8GM4
Functional construct of the Eukaryotic elongation factor 2 kinase bound to an ATP-competitive inhibitor
Deposited 2023-03-24
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
2–149(148 aa)
|
Not recorded
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
EKI 7-amino-1-cyclopropyl-3-ethyl-2,4-dioxo-1,2,3,4-tetrahydropyrido[2,3-d]pyrimidine-6-carboxamide × 1
ZN ZINC ION × 1
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.2;295.15 K;Cocktail:16.55% PEG-3350, 200 mM NaF, 100 mM BisTris-Propane
Protein sol: 10.3 mg/mL 20 mM Tris pH 7.5, 100 mM NaCl, 3 mM CaCl2, 1mM TCEP, 0.3 mM ADP, 0.3 m Inhibitor , 0.7 % DMSO
2protein/1cocktail (0.2 ul total)
|
Resolution 2.12 Å
R-free 0.238
|
|
8GM5
Functional construct of the Eukaryotic elongation factor 2 kinase bound to Calmodulin, ADP and to the A-484954 inhibitor and showing two conformations for the 498-520 loop
Deposited 2023-03-24
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
2–149(148 aa)
|
Not recorded
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
EKI 7-amino-1-cyclopropyl-3-ethyl-2,4-dioxo-1,2,3,4-tetrahydropyrido[2,3-d]pyrimidine-6-carboxamide × 1
ZN ZINC ION × 1
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.5;295.15 K;Cocktail:16.55% PEG-3350, 0.2 M NaF, 100 mM BisTris-Propane
Protein solution: 10.3 mg/mL 20 mM Tris pH 7.5, 100 mM NaCl, 3 mM CaCl2, 1mM TCEP, 1.5 m Inhibitor , 3.1 % DMSO
2protein/1cocktail (0.2 ul total)
|
Resolution 2.12 Å
R-free 0.225
|
|
8IJK
human KCNQ2-CaM-Ebio1 complex in the presence of PIP2
Deposited 2023-02-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
7PN N-(1,2-dihydroacenaphthylen-5-yl)-4-fluoranyl-benzamide × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.40 Å
|
|
8J00
Human KCNQ2-CaM in complex with CBD
Deposited 2023-04-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
P0T cannabidiol × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.00 Å
|
|
8J01
Human KCNQ2-CaM in complex with CBD and PIP2
Deposited 2023-04-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain C
1–149(149 aa)
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
P0T cannabidiol × 8
PIO [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.10 Å
|
|
8J02
Human KCNQ2(F104A)-CaM-PIP2-CBD complex in state II
Deposited 2023-04-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain C
1–149(149 aa)
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
P0T cannabidiol × 4
PIO [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.50 Å
|
|
8J03
Human KCNQ2(F104A)-CaM-PIP2-CBD complex in state I
Deposited 2023-04-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
Chain J
1–149(149 aa)
|
Not recorded
|
P0T cannabidiol × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.70 Å
|
|
8J04
Human KCNQ2-CaM-HN37 complex in the presence of PIP2
Deposited 2023-04-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain C
1–149(149 aa)
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
9MF methyl N-[4-[(4-fluorophenyl)methyl-prop-2-ynyl-amino]-2,6-dimethyl-phenyl]carbamate × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.70 Å
|
|
8J05
Human KCNQ2-CaM complex in the presence of PIP2
Deposited 2023-04-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain C
1–149(149 aa)
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.70 Å
|
|
8J07
96nm repeat of human respiratory doublet microtubule and associated axonemal complexes
Deposited 2023-04-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 974
PDB declaration: 974-meric
|
Chain W
1–149(149 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 285
MG MAGNESIUM ION × 285
GDP GUANOSINE-5'-DIPHOSPHATE × 289
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.3
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.10 Å
|
|
8JFK
PhK holoenzyme in inactive state, muscle isoform
Deposited 2023-05-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 16
PDB declaration: hexadecameric
|
Chain D
1–149(149 aa)
Chain H
1–149(149 aa)
Chain L
1–149(149 aa)
Chain P
1–149(149 aa)
|
Not recorded
|
FAR FARNESYL × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.90 Å
|
|
8ODZ
Cryo-EM structure of a pre-dimerized murine IL-12 complete extracellular signaling complex (Class 1).
Deposited 2023-03-10
|
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain D
5–149(145 aa)
|
Not recorded
|
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 5
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4;HEPES-buffered saline (HBS) with added calcium chloride: 25 mM HEPES, pH 7.4, 150 mM NaCl, 5 mM CaCl
cryo-EM vitrification conditions
Cryogen ETHANE;Leica EM GP2, 5 s. blotting time.
|
Resolution 3.60 Å
|
|
8OE4
Cryo-EM structure of a pre-dimerized human IL-23 complete extracellular signaling complex.
Deposited 2023-03-10
|
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain C
5–149(145 aa)
|
Not recorded
|
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4;HEPES-buffered saline (HBS) with added calcium chloride: 25 mM HEPES, pH 7.4, 150 mM NaCl, 5 mM CaCl
cryo-EM vitrification conditions
Cryogen ETHANE;Leica EM GP2, 4.5 s. blotting time.
|
Resolution 3.60 Å
|
|
8PB1
Cryo-EM structure of a pre-dimerized murine IL-12 complete extracellular signaling complex (Class 1), obtained after local refinement.
Deposited 2023-06-08
|
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain D
5–149(145 aa)
|
Not recorded
|
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4;HEPES-buffered saline (HBS) with added calcium chloride: 25 mM HEPES, pH 7.4, 150 mM NaCl, 5 mM CaCl
cryo-EM vitrification conditions
Cryogen ETHANE;Leica EM GP2, 5 s. blotting time.
|
Resolution 3.50 Å
|
|
8SIK
KCNQ1 with voltage sensor in the up conformation
Deposited 2023-04-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.90 Å
|
|
8SIM
KCNQ1 with voltage sensor in the intermediate conformation
Deposited 2023-04-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.20 Å
|
|
8SIN
KCNQ1 with voltage sensor in the down conformation
Deposited 2023-04-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.80 Å
|
|
8UXL
Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium and calmodulin
Deposited 2023-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain I
1–149(149 aa)
Chain J
1–149(149 aa)
Chain K
1–149(149 aa)
Chain L
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 8
CA CALCIUM ION × 20
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4;0.020 mM Calmodulin was added to the final sample
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.12 Å
|
|
8UXM
Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium and calmodulin
Deposited 2023-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain I
1–149(149 aa)
Chain J
1–149(149 aa)
Chain K
1–149(149 aa)
Chain L
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 20
ZN ZINC ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4;0.020 mM Calmodulin was added to the final sample
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.56 Å
|
|
8W4U
human KCNQ2-CaM in complex with PIP2 and HN37
Deposited 2023-08-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain C
1–149(149 aa)
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
9MF methyl N-[4-[(4-fluorophenyl)methyl-prop-2-ynyl-amino]-2,6-dimethyl-phenyl]carbamate × 4
PIO [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.30 Å
|
|
8X43
human KCNQ2-CaM-Ebio1-S1 complex in the presence of PIP2
Deposited 2023-11-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
7Q0 N-(4-azanyl-1,2-dihydroacenaphthylen-5-yl)-4-fluoranyl-benzamide × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.00 Å
|
|
8XJI
Structure of chimeric RyR complex with flubendiamide
Deposited 2023-12-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain I
1–148(148 aa)
Chain J
1–148(148 aa)
Chain K
1–148(148 aa)
Chain L
1–148(148 aa)
|
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
|
A1LVX Flubendiamide × 4
ZN ZINC ION × 4
CA CALCIUM ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
CFF CAFFEINE × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.91 Å
|
|
8XKH
Structure of chimeric RyR Complex with tetraniliprole
Deposited 2023-12-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain I
1–149(149 aa)
Chain J
1–149(149 aa)
Chain K
1–149(149 aa)
Chain L
1–149(149 aa)
|
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
|
ZN ZINC ION × 4
CA CALCIUM ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
CFF CAFFEINE × 4
A1LV1 tetraniliprole × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.87 Å
|
|
8XLF
Structure of chimeric RyR
Deposited 2023-12-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain I
1–148(148 aa)
Chain J
1–148(148 aa)
Chain K
1–148(148 aa)
Chain L
1–148(148 aa)
|
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
|
CA CALCIUM ION × 4
ZN ZINC ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
CFF CAFFEINE × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.62 Å
|
|
8XLH
Structure of chimeric RyR-I4657M/G4819E
Deposited 2023-12-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain I
1–149(149 aa)
Chain J
1–149(149 aa)
Chain K
1–149(149 aa)
Chain L
1–149(149 aa)
|
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
|
ZN ZINC ION × 4
CA CALCIUM ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
CFF CAFFEINE × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.62 Å
|
|
8XO1
Human KCNQ2-CaM in complex with QO-83
Deposited 2023-12-31
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
A1LWZ ~{N}-[2-azanyl-3-fluoranyl-4-[[4-(trifluoromethyl)phenyl]methylamino]phenyl]-3-cyclopentyl-propanamide × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.80 Å
|
|
8XYA
hPhK alpha-beta-gamma-delta subcomplex in inactive state
Deposited 2024-01-19
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain D
1–149(149 aa)
|
Not recorded
|
FAR FARNESYL × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.70 Å
|
|
8XYB
hPhK gamma-delta subcomplex in inactive state
Deposited 2024-01-19
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain D
1–149(149 aa)
|
Not recorded
|
FAR FARNESYL × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.10 Å
|
|
8Y40
Structure of chimeric RyR-I4657M/G4819E complex with chlorantraniliprole
Deposited 2024-01-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: 12-meric
|
Chain I
1–149(149 aa)
Chain J
1–149(149 aa)
Chain K
1–149(149 aa)
Chain L
1–149(149 aa)
|
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
Mutation:E32A, E68A, E105A, E141A
|
F0U 5-bromanyl-N-[4-chloranyl-2-methyl-6-(methylcarbamoyl)phenyl]-2-(3-chloranylpyridin-2-yl)pyrazole-3-carboxamide × 4
ZN ZINC ION × 4
CA CALCIUM ION × 4
ATP ADENOSINE-5'-TRIPHOSPHATE × 4
CFF CAFFEINE × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.58 Å
|
|
9CUI
Structure of human full-length ancestral TRPV6 channel in Calmodulin-bound state
Deposited 2024-07-26
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain E
1–149(149 aa)
|
Not recorded
|
Y01 CHOLESTEROL HEMISUCCINATE × 8
CLR CHOLESTEROL × 4
PCW 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE × 43
CA CALCIUM ION × 7
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.42 Å
|
|
9CUK
Structure of human full-length derived TRPV6 channel in Calmodulin-bound state
Deposited 2024-07-26
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain E
1–149(149 aa)
|
Not recorded
|
Y01 CHOLESTEROL HEMISUCCINATE × 8
CLR CHOLESTEROL × 4
PCW 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE × 43
CA CALCIUM ION × 7
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.26 Å
|
|
9D9Z
Structure of human UBR4-KCMF1-CaM E3 ligase complex (Silencing Factor of the Integrated stress response, SiFI)
Deposited 2024-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain C
1–149(149 aa)
Chain D
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 20
CA CALCIUM ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.40 Å
|
|
9E17
Structure of RyR1 in the primed state in the presence of caffeine (reprocessed/reanalyzed from EMPIAR-10997, 7TZC, EMD-26205)
Deposited 2024-10-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: 12-meric
|
Chain C
1–149(149 aa)
Chain D
1–149(149 aa)
Chain E
1–149(149 aa)
Chain K
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 20
ATP ADENOSINE-5'-TRIPHOSPHATE × 8
ZN ZINC ION × 4
CFF CAFFEINE × 4
KVR 4-[(7-methoxy-2,3-dihydro-1,4-benzothiazepin-4(5H)-yl)methyl]benzoic acid × 4
L9R (2S)-3-(octadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.45 Å
|
|
9EL6
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation F90L
Deposited 2024-12-04
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293.15 K;0.1M PCTP (pH8.0), 25% (w/v) PEG 1500
|
Resolution 2.25 Å
R-free 0.301
|
|
9EL6
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation F90L
Deposited 2024-12-04
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain E
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293.15 K;0.1M PCTP (pH8.0), 25% (w/v) PEG 1500
|
Resolution 2.25 Å
R-free 0.301
|
|
9HXW
Cryo-EM structure of the human UBR4/KCMF1/CALM1 complex (composite map)
Deposited 2025-01-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 20
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.10 Å
|
|
9IXZ
human KCNQ2-CaM-Ebio3 Complex in the Presence of PIP2
Deposited 2024-07-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
A1L3D ~{N}-[7-[bis(fluoranyl)methoxy]-1-prop-2-ynyl-indazol-3-yl]-2-propyl-pentanamide × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.20 Å
|
|
9J38
human KCNQ5-CaM in apo state
Deposited 2024-08-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.40 Å
|
|
9JQI
Crystal structure of calmodulin in complex with KN93 (1:1 complex)
Deposited 2024-09-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
1–149(149 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 4
KN9 N-[2-[[[3-(4'-Chlorophenyl)-2-propenyl]methylamino]methyl]phenyl]-N-(2-hydroxyethyl)-4'-methoxybenzenesulfonamide × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;277 K;sodium acetate, sodium cacodylate, PEG 8000
|
Resolution 2.10 Å
R-free 0.288
|
|
9JQI
Crystal structure of calmodulin in complex with KN93 (1:1 complex)
Deposited 2024-09-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
1–149(149 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 4
KN9 N-[2-[[[3-(4'-Chlorophenyl)-2-propenyl]methylamino]methyl]phenyl]-N-(2-hydroxyethyl)-4'-methoxybenzenesulfonamide × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;277 K;sodium acetate, sodium cacodylate, PEG 8000
|
Resolution 2.10 Å
R-free 0.288
|
|
9JQI
Crystal structure of calmodulin in complex with KN93 (1:1 complex)
Deposited 2024-09-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
1–149(149 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 4
KN9 N-[2-[[[3-(4'-Chlorophenyl)-2-propenyl]methylamino]methyl]phenyl]-N-(2-hydroxyethyl)-4'-methoxybenzenesulfonamide × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;277 K;sodium acetate, sodium cacodylate, PEG 8000
|
Resolution 2.10 Å
R-free 0.288
|
|
9K8W
Crystal structure of the calcium indicator GCaMP6s-BrUS in calcium-bound state
Deposited 2024-10-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Mutation:A314P/N373D/D391Y/T392R/S394T/R403G
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;288 K;0.2 M Ammonium tartrate dibasic, pH 7.0, 20% PEG 3350
|
Resolution 2.65 Å
R-free 0.236
|
|
9K8X
Crystal structure of the calcium indicator GCaMP6s-BrUS-145 in calcium-bounded state
Deposited 2024-10-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
2–149(148 aa)
|
Mutation:A313P/N372D/D390Y/T391R/S393T/R402G
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
EDO 1,2-ETHANEDIOL × 6
CA CALCIUM ION × 4
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;288 K;0.2M Sodium thiocyanate, pH 6.9, 20% PEG 3350
|
Resolution 2.05 Å
R-free 0.251
|
|
9KUI
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation F142L
Deposited 2024-12-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Mutation:F142L
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.1M Tris (pH8.5), 0.2 M Trimethylamine N-oxide dihydrate, 25% (w/v) PEG 3350
|
Resolution 2.68 Å
R-free 0.275
|
|
9KUO
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation Q136P
Deposited 2024-12-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Mutation:Q136P
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.1M MMT (pH8.0), 25% (w/v) PEG 1500
|
Resolution 3.13 Å
R-free 0.277
|
|
9KUO
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation Q136P
Deposited 2024-12-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain E
1–149(149 aa)
|
Mutation:Q136P
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.1M MMT (pH8.0), 25% (w/v) PEG 1500
|
Resolution 3.13 Å
R-free 0.277
|
|
9KUU
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation D130G
Deposited 2024-12-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Mutation:D130G
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.1 M Tris (pH 8.5), 0.2 M Sodium acetate trihydrate, 30% (w/v) PEG4000
|
Resolution 2.50 Å
R-free 0.262
|
|
9KUU
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation D130G
Deposited 2024-12-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain E
1–149(149 aa)
|
Mutation:D130G
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.1 M Tris (pH 8.5), 0.2 M Sodium acetate trihydrate, 30% (w/v) PEG4000
|
Resolution 2.50 Å
R-free 0.262
|
|
9KUZ
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation D134H
Deposited 2024-12-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Mutation:D134H
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.1 M Hepes (pH 7.5), 25% (w/v) PEGMME2000
|
Resolution 2.07 Å
R-free 0.268
|
|
9KUZ
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation D134H
Deposited 2024-12-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain F
1–149(149 aa)
|
Mutation:D134H
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.1 M Hepes (pH 7.5), 25% (w/v) PEGMME2000
|
Resolution 2.07 Å
R-free 0.268
|
|
9KV1
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation E141G
Deposited 2024-12-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Mutation:E141G
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.1M MMT (pH9.0), 25% (w/v) PEG 1500
|
Resolution 2.30 Å
R-free 0.292
|
|
9KV9
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation E141G-Ca
Deposited 2024-12-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Mutation:E141G
|
CA CALCIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.1M MMT (pH9.0), 25% (w/v) PEG 1500
|
Resolution 2.05 Å
R-free 0.279
|
|
9KVB
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin
Deposited 2024-12-04
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.2 M NH4CH3COO (PH8.5), 27% (w/v) PEG3350
|
Resolution 2.77 Å
R-free 0.342
|
|
9KVO
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation D132E
Deposited 2024-12-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Mutation:D132E
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.1M Tris (pH8.5), 0.2M Sodium acetate trihydrate, 32% PEG4000
|
Resolution 3.14 Å
R-free 0.345
|
|
9KVO
Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation D132E
Deposited 2024-12-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
1–149(149 aa)
|
Mutation:D132E
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;298.15 K;0.1M Tris (pH8.5), 0.2M Sodium acetate trihydrate, 32% PEG4000
|
Resolution 3.14 Å
R-free 0.345
|
|
9MVW
Crystal structure of S101F calmodulin - CaM:RM20 analog complex
Deposited 2025-01-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Mutation:S101F
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 4.6;295 K;0.1M Sodium Acetate pH 4.6, 25%(w/v) PEG 4000, 20mM CaCl2
|
Resolution 1.58 Å
R-free 0.237
|
|
9MXD
Human E104A calmodulin:MLCK RM20 complex
Deposited 2025-01-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Mutation:E104A
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 4.6;293 K;0.1M Sodium Acetate pH 4.6, 25%(w/v) PEG 4000, 20mM CaCl2
|
Resolution 1.17 Å
R-free 0.178
|
|
9MY3
Structure of Xenopus KCNQ1-CaM in GDN
Deposited 2025-01-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.2
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.46 Å
|
|
9MY4
Structure of Xenopus KCNQ1(E150R/R221E)-CaM with the VSD in the intermediate state
Deposited 2025-01-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.2
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.53 Å
|
|
9NVN
Structure of Nanchung-Inactive-Calmodulin in apo state
Deposited 2025-03-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain E
1–74(74 aa)
Chain F
1–74(74 aa)
|
Not recorded
|
6OU [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate × 12
LBN 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine × 6
CA CALCIUM ION × 6
D39 (2~{S})-2-azanyl-3-[[(2~{R})-3-hexadecanoyloxy-2-[(~{Z})-octadec-9-enoyl]oxy-propoxy]-oxidanyl-phosphoryl]oxy-propanoic acid × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.89 Å
|
|
9NVO
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide
Deposited 2025-03-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain E
1–74(74 aa)
Chain F
1–74(74 aa)
|
Not recorded
|
6OU [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate × 14
LBN 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine × 6
NCA NICOTINAMIDE × 2
CA CALCIUM ION × 6
D39 (2~{S})-2-azanyl-3-[[(2~{R})-3-hexadecanoyloxy-2-[(~{Z})-octadec-9-enoyl]oxy-propoxy]-oxidanyl-phosphoryl]oxy-propanoic acid × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.49 Å
|
|
9NVP
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide, EDTA
Deposited 2025-03-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
|
Not recorded
|
6OU [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate × 14
LBN 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine × 6
NCA NICOTINAMIDE × 2
D39 (2~{S})-2-azanyl-3-[[(2~{R})-3-hexadecanoyloxy-2-[(~{Z})-octadec-9-enoyl]oxy-propoxy]-oxidanyl-phosphoryl]oxy-propanoic acid × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.85 Å
|
|
9NVQ
Structure of Nanchung-Inactive-Calmodulin in complex with Afidopyropen and calcium
Deposited 2025-03-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain E
1–74(74 aa)
Chain F
1–74(74 aa)
|
Not recorded
|
6OU [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate × 12
LBN 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine × 6
A1B32 Afidopyropen × 2
CA CALCIUM ION × 6
D39 (2~{S})-2-azanyl-3-[[(2~{R})-3-hexadecanoyloxy-2-[(~{Z})-octadec-9-enoyl]oxy-propoxy]-oxidanyl-phosphoryl]oxy-propanoic acid × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.01 Å
|
|
9NVR
Structure of Nanchung-Inactive-Calmodulin in complex with Afidopyropen, EDTA
Deposited 2025-03-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
|
Not recorded
|
6OU [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate × 8
LBN 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine × 2
A1B32 Afidopyropen × 2
D39 (2~{S})-2-azanyl-3-[[(2~{R})-3-hexadecanoyloxy-2-[(~{Z})-octadec-9-enoyl]oxy-propoxy]-oxidanyl-phosphoryl]oxy-propanoic acid × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.13 Å
|
|
9NWE
E3 ligase UBR4-KCMF1-calmodulin complex
Deposited 2025-03-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain C
1–149(149 aa)
Chain D
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 6
CA CALCIUM ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.20 Å
|
|
9O48
Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex in the Ca2+ bound state
Deposited 2025-04-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
K POTASSIUM ION × 2
CA CALCIUM ION × 16
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8;20 mM Tris pH 8, 150 mM KCl, 2 mM CaCl2, 0.005% GDN, 0.0005% CHS
cryo-EM vitrification conditions
Cryogen ETHANE;5 uL of sample was applied to grids at 4 degree temperature with 100% humidity. After 30 seconds, grids were blotted for 5 seconds with blot force 25 and plunged into liquid ethane.
|
Resolution 3.10 Å
|
|
9O51
Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex in the Ca2+ free state
Deposited 2025-04-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
K POTASSIUM ION × 2
CA CALCIUM ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8;20 mM Tris pH 8, 150 mM KCl, 5 mM EGTA, 0.005% GDN, 0.0005% CHS
cryo-EM vitrification conditions
Cryogen ETHANE;5 uL of sample was applied to grids at 4 degree temperature with 100% humidity. After 30 seconds, grids were blotted for 5 seconds with blot force 25 and plunged into liquid ethane.
|
Resolution 3.40 Å
|
|
9O52
Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex bound to the bee toxin apamin
Deposited 2025-04-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 9
PDB declaration: nonameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
K POTASSIUM ION × 4
CA CALCIUM ION × 16
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8;20 mM Tris pH 8, 150 mM KCl, 2 mM CaCl2, 0.005% GDN, 0.0005% CHS
cryo-EM vitrification conditions
Cryogen ETHANE;5 uL of sample was applied to grids at 4 degree temperature with 100% humidity. After 30 seconds, grids were blotted for 5 seconds with blot force 25 and plunged into liquid ethane.
|
Resolution 3.18 Å
|
|
9O53
Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex bound to a small molecule inhibitor
Deposited 2025-04-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
A1B8D N-(2,1,3-benzoxadiazol-4-yl)-3-(4-methoxybenzene-1-sulfonamido)benzamide × 4
K POTASSIUM ION × 4
CA CALCIUM ION × 16
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8;20 mM Tris pH 8, 150 mM KCl, 2 mM CaCl2, 0.005% GDN, 0.0005% CHS
cryo-EM vitrification conditions
Cryogen ETHANE;5 uL of sample was applied to grids at 4 degree temperature with 100% humidity. After 30 seconds, grids were blotted for 5 seconds with blot force 25 and plunged into liquid ethane.
|
Resolution 3.30 Å
|
|
9O5O
Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex bound to a small molecule activator
Deposited 2025-04-10
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
A1B8G N-(2,1,3-benzoxadiazol-4-yl)-4-(trifluoromethyl)benzamide × 4
K POTASSIUM ION × 2
CA CALCIUM ION × 16
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8;20 mM Tris pH 8, 150 mM KCl, 2 mM CaCl2, 0.005% GDN, 0.0005% CHS
cryo-EM vitrification conditions
Cryogen ETHANE;5 uL of sample was applied to grids at 4 degree temperature with 100% humidity. After 30 seconds, grids were blotted for 5 seconds with blot force 25 and plunged into liquid ethane.
|
Resolution 3.10 Å
|
|
9OCW
A constitutively active construct of eukaryotic elongation factor 2 kinase
Deposited 2025-04-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
78–149(72 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
ADP ADENOSINE-5'-DIPHOSPHATE × 2
ZN ZINC ION × 1
CA CALCIUM ION × 2
MG MAGNESIUM ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;298.15 K;2 ul of protein were mixed with 1 ul of a 18.8% PEG3350 (Hampton Research) and 314 mM magnesium acetate (pH
not adjusted) solution in a 24 wells plate at room temperature
|
Resolution 2.27 Å
R-free 0.257
|
|
9PCQ
Phosphorylation of a Conserved Aspartate at the Eukaryotic Elongation Factor 2 Kinase Catalytic Site
Deposited 2025-06-28
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B00A
3–149(147 aa)
|
Not recorded
|
ADP ADENOSINE-5'-DIPHOSPHATE × 2
MN MANGANESE (II) ION × 2
ZN ZINC ION × 1
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 7.5;298.15 K;Protein was mixed 1/1 with 100 mM BisTrisPropane, 80 mM NaF, 20% w/v PEG3350
|
Resolution 2.30 Å
R-free 0.243
|
|
9PQH
NMR Structure of Ca2+/Calmodulin bound to the GluN1 C0 domain of the NMDA receptor
Deposited 2025-07-22
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 4
|
SOLUTION NMR
NMR measurement conditions
pH 7;308 K;Ionic strength (raw mmCIF value) 1;Pressure 1
NMR sample composition
0.4 mM [U-99% 13C; U-99% 15N] Calmodulin, 1.0 mM GluN1 C0, 1 mM Calcium chloride, 20 mM [U-99% 2H] TRIS, 93 % H2O, 7 % [U-2H] D2O, 93% H2O/7% D2O | 93% H2O/7% D2O
NMR sample composition
0.4 mM [U-99% 13C; U-99% 15N] Calmodulin, 1.0 mM GluN1 C0, 1 mM Calcium chloride, 20 mM [U-99% 2H] TRIS, 100 % [U-2H] D2O, 100% D2O | 100% D2O
|
Resolution not provided
|
|
9PQI
NMR Structure of Ca2+/Calmodulin bound to the GluN2A C0 domain of the NMDA receptor
Deposited 2025-07-22
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 2
|
SOLUTION NMR
NMR measurement conditions
pH 7;308 K;Ionic strength (raw mmCIF value) 1;Pressure 1
NMR sample composition
400 uM [U-100% 13C; U-100% 15N] Calmodulin, 1 mM GluN2, 1 mM Calcium chloride, 20 mM [U-99% 2H] TRIS, 93 % H2O, 7 % [U-2H] D2O, 93% H2O/7% D2O | 93% H2O/7% D2O
NMR sample composition
400 uM [U-100% 13C; U-100% 15N] Calmodulin, 1 mM GluN2, 1 mM Calcium chloride, 20 mM [U-99% 2H] TRIS, 100 % [U-2H] D2O, 100% D2O | 100% D2O
|
Resolution not provided
|
|
9QWS
Cryo-EM structure of the human UBR4/KCMF1/CALM1 complex (C-term dimer interface focused refinement)
Deposited 2025-04-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.10 Å
|
|
9QWU
Cryo-EM structure of the human UBR4/KCMF1/CALM1 complex (CALM1 focused refinement)
Deposited 2025-04-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
|
Not recorded
|
ZN ZINC ION × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.10 Å
|
|
9QX0
Cryo-EM structure of the human UBR4/KCMF1/CALM1 complex (C-term focused refinement)
Deposited 2025-04-15
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain F
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.40 Å
|
|
9U7F
structure of human KCNQ1-KCNE1-CaM complex
Deposited 2025-03-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain B
1–149(149 aa)
Chain E
1–149(149 aa)
Chain H
1–149(149 aa)
Chain K
1–149(149 aa)
|
Not recorded
|
PT5 [(2R)-1-octadecanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phospho ryl]oxy-propan-2-yl] (8Z)-icosa-5,8,11,14-tetraenoate × 4
K POTASSIUM ION × 4
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.90 Å
|
|
9UC8
structure of human KCNQ1-KCNE1-CaM complex with PIP2
Deposited 2025-04-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain B
1–149(149 aa)
Chain E
1–149(149 aa)
Chain H
1–149(149 aa)
Chain K
1–149(149 aa)
|
Not recorded
|
PIO [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate × 8
K POTASSIUM ION × 3
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.36 Å
|
|
9UJ4
Structure of human KCNQ1-CaM complex
Deposited 2025-04-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
K POTASSIUM ION × 4
PC1 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE × 4
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.59 Å
|
|
9UPG
Cryo-EM structure of human olfactory CNGA2/A4/B1 in CaM-bound closed state
Deposited 2025-04-28
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain H
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 6
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.87 Å
|
|
9VEC
structure of human KCNQ1-KCNE1-CaM complex
Deposited 2025-06-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: 12-meric
|
Chain B
1–149(149 aa)
Chain E
1–149(149 aa)
Chain H
1–149(149 aa)
Chain K
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.70 Å
|
|
9VEI
structure of human KCNQ1-KCNE1-CaM complex with PIP2
Deposited 2025-06-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: 12-meric
|
Chain B
1–149(149 aa)
Chain E
1–149(149 aa)
Chain H
1–149(149 aa)
Chain K
1–149(149 aa)
|
Not recorded
|
PT5 [(2R)-1-octadecanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phospho ryl]oxy-propan-2-yl] (8Z)-icosa-5,8,11,14-tetraenoate × 8
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.90 Å
|
|
9VEN
structure of human KCNQ1-CaM-PIP2 complex with bent conformation
Deposited 2025-06-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 8
PT5 [(2R)-1-octadecanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phospho ryl]oxy-propan-2-yl] (8Z)-icosa-5,8,11,14-tetraenoate × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.80 Å
|
|
9VEO
structure of human KCNQ1-CaM-PIP2 complex with straight conformation
Deposited 2025-06-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–149(149 aa)
Chain D
1–149(149 aa)
Chain F
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
PT5 [(2R)-1-octadecanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phospho ryl]oxy-propan-2-yl] (8Z)-icosa-5,8,11,14-tetraenoate × 8
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.70 Å
|
|
9VU9
channel D complex with 4
Deposited 2025-07-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 7
PDB declaration: heptameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
|
Not recorded
|
A1ETX (3~{S})-3-(1~{H}-benzimidazol-2-ylamino)-~{N}-(cyanomethyl)-~{N}-methyl-3-[3-(trifluoromethyl)phenyl]propanamide × 1
K POTASSIUM ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.34 Å
|
|
9VUA
channel A complex with 1
Deposited 2025-07-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
|
Not recorded
|
K POTASSIUM ION × 4
POV (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.23 Å
|
|
9VUB
channel C complex with 3
Deposited 2025-07-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
POV (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate × 32
CLR CHOLESTEROL × 8
CA CALCIUM ION × 12
A1B92 Rimtuzalcap × 4
K POTASSIUM ION × 3
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.35 Å
|
|
9VUC
channel B complex with 2
Deposited 2025-07-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 7
PDB declaration: heptameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
|
Not recorded
|
K POTASSIUM ION × 4
Y7Z UCL1684 × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.96 Å
|
|
9WD8
structure of human KCNQ1-KCNE3-CaM complex with two PIP2
Deposited 2025-08-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 12
PDB declaration: dodecameric
|
Chain B
1–149(149 aa)
Chain E
1–149(149 aa)
Chain H
1–149(149 aa)
Chain K
1–149(149 aa)
|
Not recorded
|
CA CALCIUM ION × 8
A1BBG (2R)-3-{[(S)-hydroxy{[(1R,2R,3S,4R,5R,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl di[(9Z)-octadec-9-enoate] × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.90 Å
|
|
9X5J
Cryo-EM structure of the human KCNQ2/3 heteromer channel
Deposited 2025-10-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
6–148(143 aa)
Chain F
6–148(143 aa)
Chain G
6–148(143 aa)
Chain H
6–148(143 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
mmCIF provides none of the parsed conditions
|
Resolution 3.05 Å
|
|
9X65
Cryo-EM structure of the human KCNQ2/3 heteromer channel in the XEN1101-bound open state
Deposited 2025-10-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
A1EY8 Azetukalner × 4
PIO [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate × 4
K POTASSIUM ION × 3
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.19 Å
|
|
9XB9
Human KCNQ2-CaM in complex with QO-58 and PIP2
Deposited 2025-10-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
PIO [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate × 4
A1LVR QO-58 × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.10 Å
|
|
9XED
Human KCNQ2-CaM in complex with QO-83 and PIP2
Deposited 2025-10-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
1–149(149 aa)
Chain F
1–149(149 aa)
Chain G
1–149(149 aa)
Chain H
1–149(149 aa)
|
Not recorded
|
PIO [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate × 4
A1LWZ ~{N}-[2-azanyl-3-fluoranyl-4-[[4-(trifluoromethyl)phenyl]methylamino]phenyl]-3-cyclopentyl-propanamide × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.40 Å
|
|
9Y5Q
Cryo EM structure of KCa3.1_R355K_I/calmodulin channel in complex with rimtuzalcap
Deposited 2025-09-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
3–148(146 aa)
Chain F
3–148(146 aa)
Chain G
3–148(146 aa)
Chain H
3–148(146 aa)
|
Not recorded
|
K POTASSIUM ION × 1
A1B92 Rimtuzalcap × 4
CA CALCIUM ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.73 Å
|
|
9YDZ
Cryo EM structure of KCa3.1_R355K_II/calmodulin channel in complex with rimtuzalcap
Deposited 2025-09-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
82–148(67 aa)
Fragment:residues 82-148
Chain F
82–148(67 aa)
Fragment:residues 82-148
Chain G
82–148(67 aa)
Fragment:residues 82-148
Chain H
82–148(67 aa)
Fragment:residues 82-148
|
Not recorded
|
K POTASSIUM ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.40 Å
|
|
9YG4
VPS13A/Nt-CaM
Deposited 2025-09-27
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
mmCIF provides none of the parsed conditions
|
Resolution 3.38 Å
|
|
9YQP
Cryo-EM structure of the VPS13C N-terminal region in complex with Calmodulin
Deposited 2025-10-15
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
mmCIF provides none of the parsed conditions
|
Resolution 4.10 Å
|
|
9YRM
CryoEM Structure of VPS13 protein, 1-1390 from C. thermophilum, in complex with calmodulin
Deposited 2025-10-16
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
mmCIF provides none of the parsed conditions
|
Resolution 3.75 Å
|
|
9YRP
Full-length human VPS13C in complex with calmodulin from the CryoEM composite map
Deposited 2025-10-16
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–149(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
mmCIF provides none of the parsed conditions
|
Resolution 4.13 Å
|
|
9ZPO
Cryo-EM structure of KCa3.1_I/calmodulin channel in complex with SKA31.
Deposited 2025-12-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
3–148(146 aa)
Chain F
3–148(146 aa)
Chain G
3–148(146 aa)
Chain H
3–148(146 aa)
|
Not recorded
|
A1C3Q naphtho[1,2-d][1,3]thiazol-2-amine × 4
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.67 Å
|
|
9ZPT
Cryo-EM structure of KCa3.1_II/calmodulin channel in complex with SKA31.
Deposited 2025-12-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
82–148(67 aa)
Fragment:residues 82-148
Chain F
82–148(67 aa)
Fragment:residues 82-148
Chain G
82–148(67 aa)
Fragment:residues 82-148
Chain H
82–148(67 aa)
Fragment:residues 82-148
|
Not recorded
|
K POTASSIUM ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.39 Å
|
|
9ZRK
Cryo-EM structure of KCa3.1_I/calmodulin channel in complex with SKA111.
Deposited 2025-12-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
3–148(146 aa)
Chain F
3–148(146 aa)
Chain G
3–148(146 aa)
Chain H
3–148(146 aa)
|
Not recorded
|
A1C3U 5-methylnaphtho[1,2-d][1,3]thiazol-2-amine × 4
K POTASSIUM ION × 4
CA CALCIUM ION × 16
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.99 Å
|
|
9ZRL
Cryo-EM structure of KCa3.1_II/calmodulin channel in complex with SKA111.
Deposited 2025-12-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
82–148(67 aa)
Fragment:residues 82-148
Chain F
82–148(67 aa)
Fragment:residues 82-148
Chain G
82–148(67 aa)
Fragment:residues 82-148
Chain H
82–148(67 aa)
Fragment:residues 82-148
|
Not recorded
|
K POTASSIUM ION × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.38 Å
|
|
9ZRQ
Cryo-EM structure of KCa2.2/calmodulin channel in complex with SKA31.
Deposited 2025-12-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
3–148(146 aa)
Chain F
3–148(146 aa)
Chain G
3–148(146 aa)
Chain H
3–148(146 aa)
|
Not recorded
|
K POTASSIUM ION × 4
A1C3Q naphtho[1,2-d][1,3]thiazol-2-amine × 4
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.77 Å
|
|
9ZRR
Cryo-EM structure of KCa2.2/calmodulin channel in complex with SKA111.
Deposited 2025-12-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain E
3–146(144 aa)
Chain F
3–146(144 aa)
Chain G
3–146(144 aa)
Chain H
3–146(144 aa)
|
Not recorded
|
K POTASSIUM ION × 2
A1C3U 5-methylnaphtho[1,2-d][1,3]thiazol-2-amine × 4
CA CALCIUM ION × 12
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.31 Å
|