8f7d

LRRC8A(T48D):C conformation 2 top focus

Method: ELECTRON MICROSCOPY Dmax: 104.6 Å Quality: EXCELLENT

1. Protein Identity and Related Structures Protein Identity & Related Structures

Volume-regulated anion channel subunit LRRC8A,Soluble cytochrome b562

Mus musculus

UniProt P0ABE7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Insufficient information Heteromer Protein × 2 PDB declaration: dimeric(2) Consistent with protein copy count Chain A; UniProt 23–127 Mutation:T48D Volume-regulated anion channel subunit LRRC8C × 1 (Q8R502) ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4 cryo-EM vitrification conditions:Cryogen ETHANE Resolution 4.20 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

714 other PDB entries and 822 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name C562_ECOLX
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 77–181; UniProt 23–127

Volume-regulated anion channel subunit LRRC8A,Soluble cytochrome b562

Mus musculus

UniProt Q80WG5

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Insufficient information Heteromer Protein × 2 PDB declaration: dimeric(2) Consistent with protein copy count Chain A; UniProt 1–76 Chain A; UniProt 90–810 Mutation:T48D Volume-regulated anion channel subunit LRRC8C × 1 (Q8R502) ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4 cryo-EM vitrification conditions:Cryogen ETHANE Resolution 4.20 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

35 other PDB entries and 35 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name LRC8A_MOUSE
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–76; UniProt 1–76 Author chain A; PDBConstruct 182–902; UniProt 90–810

Volume-regulated anion channel subunit LRRC8C

Mus musculus

UniProt Q8R502

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Insufficient information Heteromer Protein × 2 PDB declaration: dimeric(2) Consistent with protein copy count Chain F; UniProt 1–803 Not recorded Volume-regulated anion channel subunit LRRC8A,Soluble cytochrome b562 × 1 (Q80WG5,P0ABE7) ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4 cryo-EM vitrification conditions:Cryogen ETHANE Resolution 4.20 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

17 other PDB entries and 20 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name LRC8C_MOUSE
Isoform
PDB entities 2
Chains and sequence ranges Author chain F; PDBConstruct 1–803; UniProt 1–803

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 8f7d

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 8f7d
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2. Structure Basics 2. Structure Basics

Entry ID entry_id8f7d
Deposition date deposition_date2022-11-18
Structure title titleLRRC8A(T48D):C conformation 2 top focus
Keywords keywordsion channel, volume-regulation, MEMBRANE PROTEIN; MEMBRANE PROTEIN
Experimental Method methodELECTRON MICROSCOPY

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier32.91
Radius of gyration Rg (electron density) rg_electron32.48
Forward intensity I(0) i0123469000.00
Molecular weight molecular_weight93446.0 kDa
Excluded volume excluded_volume119380 ų
Envelope volume envelope_volume152220 ų
Hydration-shell volume shell_volume39531 ų
Envelope diameter envelope_diameter104.6
Shell Rg shell_rg39.00
Envelope Rg envelope_rg31.86
Shape Rg shape_rg32.48
Total Rg total_rg33.03
Total atoms total_atoms6578
Residues n_residues811
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax104.6
Rg (real space) rg_real32.87
Rg uncertainty (real space) rg_real_error0.83
I(0) (real space) i0_real1.2350e+08
I(0) uncertainty (real space) i0_real_error2.0330e+06
Rg (reciprocal space) rg_reciprocal32.89
I(0) (reciprocal space) i0_reciprocal123500000.0000
Solution quality estimate total_estimate0.9004
Solution quality rating solution_quality EXCELLENT a EXCELLENT solution
P(r) peaks n_peaks1
Primary peak position r_peak_primary41.4
Skewness Skewness skewness0.270
Kurtosis Kurtosis kurtosis-0.508
Angular range angular_range— – 0.2400 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha44690000.0000
Real-space data points n_real_points49
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.937; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.995; Smooth: 0.896

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (2)

8. Citations (1)

9. Files and Curves (10)